PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY74025.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 683aa MW: 76336.1 Da PI: 9.4632

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY74025.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.2	3e-05	251	273	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H TEY74025.1 251 FVCEICSKGFQRDQNLQLHRRGH 273 89*******************88 PP
2	zf-C2H2	11.6	0.00085	327	349	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ TEY74025.1 327 WKCDKCSKKYAVQSDWKAHSKTC 349 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 683 aa Download sequence
MNWEHPRSRS ALMNLHLRRS RNGDADVKNE YESQNVVIVV HRVKEVIVHF FTFFFYCVIL 60 PLSVLVPQVY VPKWGAIYLP SIITILNLVG TPRSFYWVLF ENVMSFHRTK ATVMGLVEAK 120 TAKEWVISKI PVLFPNHNVV KDLSPLPTSH VARLNFSLSQ DSLSSSSHSS QTAKRNMKIS 180 AIQEENISNL TTASNDASST GGEMYPPPYF PAPTAAPPPP AKKKRSQPGH PDPGSEVISL 240 SPRALMATNR FVCEICSKGF QRDQNLQLHR RGHNLPWKLK QRSSKDVRKK VYVCPETSCV 300 HHDPSRALGD LTGIKKHFCR KHGEKKWKCD KCSKKYAVQS DWKAHSKTCG TREYRCDCGT 360 LFSRRDSFIT HRAFCDALAE ESAKTITTPT PTTPTIPPQN AANSFSHHIN LQQIQSQFSN 420 AQQQLPFPIK KENQPFTLRP PWLPPPPNID LTTPSSIFQD FQENTQNPNP NTTPTTTSMG 480 PTTSLHHAFH HHHPPPHISA TALLQRAAEM GSKSSTTPTP TRPHHPHVPA GESPASGFGL 540 KLASRDHFIN GLPPFGNKAA ASSPFMLHHD MMMFNTSTFQ HHNQESTFED DDLSFAGMLN 600 NTNNNTSPSS HSKRVDESLD FDATLNQFSA SNGGNHDDRM TRDFLGLRPL SQSDILSFAG 660 LSNCINTTSC GEHQSQSQRS WQG

Sequence ? help Back to Top

Protein Sequence Length: 683 aa Download sequence

MNWEHPRSRS ALMNLHLRRS RNGDADVKNE YESQNVVIVV HRVKEVIVHF FTFFFYCVIL  60
PLSVLVPQVY VPKWGAIYLP SIITILNLVG TPRSFYWVLF ENVMSFHRTK ATVMGLVEAK  120
TAKEWVISKI PVLFPNHNVV KDLSPLPTSH VARLNFSLSQ DSLSSSSHSS QTAKRNMKIS  180
AIQEENISNL TTASNDASST GGEMYPPPYF PAPTAAPPPP AKKKRSQPGH PDPGSEVISL  240
SPRALMATNR FVCEICSKGF QRDQNLQLHR RGHNLPWKLK QRSSKDVRKK VYVCPETSCV  300
HHDPSRALGD LTGIKKHFCR KHGEKKWKCD KCSKKYAVQS DWKAHSKTCG TREYRCDCGT  360
LFSRRDSFIT HRAFCDALAE ESAKTITTPT PTTPTIPPQN AANSFSHHIN LQQIQSQFSN  420
AQQQLPFPIK KENQPFTLRP PWLPPPPNID LTTPSSIFQD FQENTQNPNP NTTPTTTSMG  480
PTTSLHHAFH HHHPPPHISA TALLQRAAEM GSKSSTTPTP TRPHHPHVPA GESPASGFGL  540
KLASRDHFIN GLPPFGNKAA ASSPFMLHHD MMMFNTSTFQ HHNQESTFED DDLSFAGMLN  600
NTNNNTSPSS HSKRVDESLD FDATLNQFSA SNGGNHDDRM TRDFLGLRPL SQSDILSFAG  660
LSNCINTTSC GEHQSQSQRS WQG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	278	290	KLKQRSSKDVRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66730.1	3e-96	C2H2 family protein