PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY73936.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 1297aa MW: 143327 Da PI: 7.721

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY73936.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.2	0.00013	258	280	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp+C+k F+++ L+ H + H TEY73936.1 258 VCPKCSKGFRDPVKLVEHVERdH 280 7*****************99888 PP

Sequence ? help Back to Top
Protein Sequence Length: 1297 aa Download sequence
MGTPAIPNLG KHCSVEDCRQ IDFLPFTCDC CQKVFCLDHR SYSRHQCPKA GKNDVTVVVC 60 PLCAKGVRLI PEEDPNITWE SHINIDCDPS NYEQATKKRK CPVPRCKELL TFSNTIKCRD 120 CNIDHCLKHR FGPDHSCPGP RKPEPSFQFM GFMNKSRKDG PKQAAASSSS KWTSGFLNLA 180 SSVRASAEAG MTKLSNEFNQ ALSTNGGAQN SNSTSTSTSH HVEVCPQCKL RFSSVGALVD 240 HVEKVHEKHG VMKATLDVCP KCSKGFRDPV KLVEHVERDH GGIGLKGGTG IPEVVSRQVL 300 PACGNLCFLC PAMRERSRQP VKRYKKLISD IFPKSQDEEP NDRKIGKLCE YAVRNPFRIP 360 KIASSLEQKL YKELRNENFH AVKVVMCHVL LVLTVVSSDA LFKLRVLWFP CGSIRLIQLV 420 FPTMQNDGTY MFTLDGFIPR LCELAQEVGE DEKVQHLRAA GLQTLSAMVW FMGENSHISA 480 EFDNIVTVVL ENYGGESKDL NSNQASWGEE VGKIEGNVSP SPNVVRKVSS WKMVVNDKGN 540 LNVEEEDSKN PWFWSRVCLH NMASLGKEAT TLRRVMESLF RYFDSGNMWP VKDGIALPVL 600 KDVQFFMDDT GLFPSLVSFY KFLSSSLIQS DDVPTINYTG QNTHFLLSIL VKHLDHKNVL 660 KQPEMQLDIV HVTTALARMS KIQSSVAIVS AVSDIMKHLR KSIHNKLDEN LGKDLIKWNM 720 KYHEAVDECL IELSSKVGDA GLILDVMASM LENIPSINII ARTTISAAFP DALFHQLLPA 780 MLHPDHDTRI GAHQIFSVVL VPSSIAPQSD HDVSDSKKNV LYPRTLSRTV SVFSSSAALF 840 DKMKHQRVQH AEPNKSKPSG DVGQENNTGG VLNRIKSGYN RVQSFRQSAP EPDSTTKSIK 900 QMDVVPLRLS SHQINLLLSS IWAQSVAPEN LPEDYVALAH TYSLMLLFSR AKTSYRDALV 960 RSFQMAFSLR DVSLAAEVLF SGVLPPSRRR SLFMLATSMI FFASKAYSVV PVAARVKSML 1020 TSKVIDPFLS LVDDSKLQTS ETGKIAYGSQ EDDSSALKFL SGTKIYDEQT TASLTSLIVK 1080 SLDNLPESEV SSAREQLLKE FVPEDLGSLR GAWLADCPEG RHMHNNSCLC GDKSFDKAAS 1140 IFVDDDAFPE SVGAGKQNTQ LAVQNPNLIS VDQLLLSVSE TATNVGRMSM CTADDASYKE 1200 TANHCETLLM GKQKKISNLI SAHHKPGPLM AIAAQAESKT TVSHVSNQHK AGNLFLDDNI 1260 LGLPVVPIAG PCATEAQNEF RLPSASPFDN FLKAAGC

Sequence ? help Back to Top

Protein Sequence Length: 1297 aa Download sequence

MGTPAIPNLG KHCSVEDCRQ IDFLPFTCDC CQKVFCLDHR SYSRHQCPKA GKNDVTVVVC  60
PLCAKGVRLI PEEDPNITWE SHINIDCDPS NYEQATKKRK CPVPRCKELL TFSNTIKCRD  120
CNIDHCLKHR FGPDHSCPGP RKPEPSFQFM GFMNKSRKDG PKQAAASSSS KWTSGFLNLA  180
SSVRASAEAG MTKLSNEFNQ ALSTNGGAQN SNSTSTSTSH HVEVCPQCKL RFSSVGALVD  240
HVEKVHEKHG VMKATLDVCP KCSKGFRDPV KLVEHVERDH GGIGLKGGTG IPEVVSRQVL  300
PACGNLCFLC PAMRERSRQP VKRYKKLISD IFPKSQDEEP NDRKIGKLCE YAVRNPFRIP  360
KIASSLEQKL YKELRNENFH AVKVVMCHVL LVLTVVSSDA LFKLRVLWFP CGSIRLIQLV  420
FPTMQNDGTY MFTLDGFIPR LCELAQEVGE DEKVQHLRAA GLQTLSAMVW FMGENSHISA  480
EFDNIVTVVL ENYGGESKDL NSNQASWGEE VGKIEGNVSP SPNVVRKVSS WKMVVNDKGN  540
LNVEEEDSKN PWFWSRVCLH NMASLGKEAT TLRRVMESLF RYFDSGNMWP VKDGIALPVL  600
KDVQFFMDDT GLFPSLVSFY KFLSSSLIQS DDVPTINYTG QNTHFLLSIL VKHLDHKNVL  660
KQPEMQLDIV HVTTALARMS KIQSSVAIVS AVSDIMKHLR KSIHNKLDEN LGKDLIKWNM  720
KYHEAVDECL IELSSKVGDA GLILDVMASM LENIPSINII ARTTISAAFP DALFHQLLPA  780
MLHPDHDTRI GAHQIFSVVL VPSSIAPQSD HDVSDSKKNV LYPRTLSRTV SVFSSSAALF  840
DKMKHQRVQH AEPNKSKPSG DVGQENNTGG VLNRIKSGYN RVQSFRQSAP EPDSTTKSIK  900
QMDVVPLRLS SHQINLLLSS IWAQSVAPEN LPEDYVALAH TYSLMLLFSR AKTSYRDALV  960
RSFQMAFSLR DVSLAAEVLF SGVLPPSRRR SLFMLATSMI FFASKAYSVV PVAARVKSML  1020
TSKVIDPFLS LVDDSKLQTS ETGKIAYGSQ EDDSSALKFL SGTKIYDEQT TASLTSLIVK  1080
SLDNLPESEV SSAREQLLKE FVPEDLGSLR GAWLADCPEG RHMHNNSCLC GDKSFDKAAS  1140
IFVDDDAFPE SVGAGKQNTQ LAVQNPNLIS VDQLLLSVSE TATNVGRMSM CTADDASYKE  1200
TANHCETLLM GKQKKISNLI SAHHKPGPLM AIAAQAESKT TVSHVSNQHK AGNLFLDDNI  1260
LGLPVVPIAG PCATEAQNEF RLPSASPFDN FLKAAGC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41835.1	1e-112	C2H2 family protein