PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY72385.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB

Protein Properties

Length: 314aa MW: 34746.3 Da PI: 8.2387

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY72385.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	64.7	1.7e-20	10	55	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEdell ++v+++G+++W++I++ ++ gR++k+c++rw + TEY72385.1 10 KGPWSPEEDELLQKLVEKHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 55 79****************************.*********985 PP
2	Myb_DNA-binding	54.4	2.8e-17	64	106	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEde +++a++++G++ W+tIar + gRt++ +k++w++ TEY72385.1 64 SFTAEEDETIIRAHARFGNK-WATIARLLS-GRTDNAIKNHWNST 106 69****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence
MERSESDRIK GPWSPEEDEL LQKLVEKHGP RNWSLISKSI PGRSGKSCRL RWCNQLSPQV 60 EHRSFTAEED ETIIRAHARF GNKWATIARL LSGRTDNAIK NHWNSTLKRK CVSMSEEFND 120 FDPEARQPLK RSSSVGPGTN VSVSGFCFNP GSPDGSDMSD SSHSGHLVYR PIARTGGISP 180 PDPQPDPVTS LSLSLPGLDP SPNQSVLELE PQIAADRSVK SVPVLPQHSI QMFASHPPPP 240 PPPPPLPPAI NQIRQFAPAA DKQFFSPEFL AVMQDMVRKE VQNYMAGMDQ KGFCIQSEAI 300 RNAVVKRMGI SKID

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	1e-72	MYB family protein