PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY72278.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 385aa MW: 44258.3 Da PI: 7.3577

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY72278.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.7	0.00039	79	101	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ Cgk+F + +L++H H TEY72278.1 79 CSyeGCGKTFIDAGTLRKHSHIH 101 77779**************7766 PP
2	zf-C2H2	15.9	3.8e-05	106	130	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ +Cgk F ++s LkrH H TEY72278.1 106 YVCHyeNCGKKFLDSSKLKRHFLIH 130 9********************8877 PP
3	zf-C2H2	21.6	5.5e-07	136	160	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp Cgk Fs nL++H++tH TEY72278.1 136 FVCPheGCGKAFSLDFNLRSHMKTH 160 89**********************9 PP
4	zf-C2H2	17	1.7e-05	166	190	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp dCgk++ + + Lk+Hi +H TEY72278.1 166 HICPysDCGKRYAHEYKLKNHIASH 190 68*********************96 PP
5	zf-C2H2	11.4	0.001	242	267	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 + Cp C k + + + L+ H+r+ H TEY72278.1 242 HACPyeGCEKAYIHEYKLNLHLRReH 267 579999*****************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
METHISHSPF DRRPMSRSRG PAVKWFKEWV PQDIVSNGGK CLVLKWVNEA TMRAMKEKSK 60 ESEVGEPEPE PTTEVLFLCS YEGCGKTFID AGTLRKHSHI HGERQYVCHY ENCGKKFLDS 120 SKLKRHFLIH TGERDFVCPH EGCGKAFSLD FNLRSHMKTH AQENYHICPY SDCGKRYAHE 180 YKLKNHIASH HEKANVMETP KYVMPPEKPV KTPRSTAGAT PRSTTGATPR STTGPASSDR 240 PHACPYEGCE KAYIHEYKLN LHLRREHPGH FPDENAKANQ QNTEHEMDEG SDQDAYAGKR 300 GNSKVRKQSR PKPNLKLPPS KVSRRKTSTV SPVNLNLVKK HRPLKEEIYE EEDSEETEEE 360 RENIAEGWRY SNNNEDDDEE TEYED

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

METHISHSPF DRRPMSRSRG PAVKWFKEWV PQDIVSNGGK CLVLKWVNEA TMRAMKEKSK  60
ESEVGEPEPE PTTEVLFLCS YEGCGKTFID AGTLRKHSHI HGERQYVCHY ENCGKKFLDS  120
SKLKRHFLIH TGERDFVCPH EGCGKAFSLD FNLRSHMKTH AQENYHICPY SDCGKRYAHE  180
YKLKNHIASH HEKANVMETP KYVMPPEKPV KTPRSTAGAT PRSTTGATPR STTGPASSDR  240
PHACPYEGCE KAYIHEYKLN LHLRREHPGH FPDENAKANQ QNTEHEMDEG SDQDAYAGKR  300
GNSKVRKQSR PKPNLKLPPS KVSRRKTSTV SPVNLNLVKK HRPLKEEIYE EEDSEETEEE  360
RENIAEGWRY SNNNEDDDEE TEYED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G06634.1	1e-140	C2H2 family protein