PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY68531.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 877aa MW: 97584.4 Da PI: 8.2822

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY68531.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.8	8.2e-05	79	100	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC++C + F ++ n++rHir+H TEY68531.1 79 KCEKCYREFCSPINYRRHIRVH 100 7*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 877 aa Download sequence
MPAAKLYSSG TLNAMKSEEG NDSLGTFIKQ ATGREPLLPF PRTVDGPVQW IQLLNALDQP 60 VVDFSGLPLL TPVKVQMQKC EKCYREFCSP INYRRHIRVH RRSLNINKEW HKNRDLLAEF 120 WDELSLQHAK ELVSFNDIIL KDIPGSSVVK ALSSSLRKAG VWTLPQAYVK AGATLLDIIQ 180 AKPSRLPISS QELFSILDDA SERTFLCAGT ADSVQNYVFD GETAKNSLEL KNLVALTSFL 240 FEQLLVKAWV ADKDAEALRC QKLLVEEEEA EQKRQAVIVE RKKQKKRRQK EQKVKEQYCG 300 CSSNLNVYID AVDRPTSAEA SDMSSPSGSN SNSQAVPTTI DSVQPQNKES DEDIEVQFDA 360 SSEHKKQRDS PAVELQMLVA NGHRHAATNR LQALKSQRGS RYGLHADLNP QTLKPELMHK 420 LGPSKDRRIE NGSKVWTKKF KNNNDWENPR PPSLEEVESN RIEQNNGEVI IGSIPVTLKS 480 YYDQQEASPP NETQDTCSAE QLKKKNASEK PVKCNSLQSG TNRAPSKLWR PVSHGETKNV 540 LTVGRINEDL EDSAMLTKVH NHTPSSERSG QSESLDSDGC QNGKQFHVIS DDNAQGGLMP 600 FYSEAVKEFL ARRWKEAIAG DHIKLALSSE REPPGRPDVQ PASGPPRSNG ENQCGRIIQA 660 QQQFSLTNHV GRNRSIGDIT LPSEDHNHPE TANAALNPAG KPSGLFTFRQ LNALAIGVVL 720 SASGMPFVFG ESNKLLSLYV AAGAAIGLFL PIAYIFEGVF EGDKEGIKAA APHVFLLASQ 780 VFVEGLSFSG GFSLPIRVFV PVFYNSRRIF TIVDWIRGEI WKADGRYEGS ARRLYVGRAL 840 AVANMAFWCF NLFGFLLPVY LPKAFRIYYQ SSHIKPN

Sequence ? help Back to Top

Protein Sequence Length: 877 aa Download sequence

MPAAKLYSSG TLNAMKSEEG NDSLGTFIKQ ATGREPLLPF PRTVDGPVQW IQLLNALDQP  60
VVDFSGLPLL TPVKVQMQKC EKCYREFCSP INYRRHIRVH RRSLNINKEW HKNRDLLAEF  120
WDELSLQHAK ELVSFNDIIL KDIPGSSVVK ALSSSLRKAG VWTLPQAYVK AGATLLDIIQ  180
AKPSRLPISS QELFSILDDA SERTFLCAGT ADSVQNYVFD GETAKNSLEL KNLVALTSFL  240
FEQLLVKAWV ADKDAEALRC QKLLVEEEEA EQKRQAVIVE RKKQKKRRQK EQKVKEQYCG  300
CSSNLNVYID AVDRPTSAEA SDMSSPSGSN SNSQAVPTTI DSVQPQNKES DEDIEVQFDA  360
SSEHKKQRDS PAVELQMLVA NGHRHAATNR LQALKSQRGS RYGLHADLNP QTLKPELMHK  420
LGPSKDRRIE NGSKVWTKKF KNNNDWENPR PPSLEEVESN RIEQNNGEVI IGSIPVTLKS  480
YYDQQEASPP NETQDTCSAE QLKKKNASEK PVKCNSLQSG TNRAPSKLWR PVSHGETKNV  540
LTVGRINEDL EDSAMLTKVH NHTPSSERSG QSESLDSDGC QNGKQFHVIS DDNAQGGLMP  600
FYSEAVKEFL ARRWKEAIAG DHIKLALSSE REPPGRPDVQ PASGPPRSNG ENQCGRIIQA  660
QQQFSLTNHV GRNRSIGDIT LPSEDHNHPE TANAALNPAG KPSGLFTFRQ LNALAIGVVL  720
SASGMPFVFG ESNKLLSLYV AAGAAIGLFL PIAYIFEGVF EGDKEGIKAA APHVFLLASQ  780
VFVEGLSFSG GFSLPIRVFV PVFYNSRRIF TIVDWIRGEI WKADGRYEGS ARRLYVGRAL  840
AVANMAFWCF NLFGFLLPVY LPKAFRIYYQ SSHIKPN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	281	287	RKKQKKR
2	281	289	RKKQKKRRQ
3	282	290	RKKQKKRRQ
4	285	290	KKRRQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25610.1	1e-111	C2H2 family protein