PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY67016.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | C3H | ||||||||
Protein Properties | Length: 332aa MW: 37047.1 Da PI: 7.6673 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 38.1 | 2.5e-12 | 193 | 218 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 y +C+++ +tG+C yGd+CkF+H+ TEY67016.1 193 YQPDICKDYKETGYCGYGDSCKFMHD 218 67789********************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 332 aa Download sequence |
MAGEEADGGA GASAEGSNVC NFFRKPSKGK NIRKRTAVEE AEGEEDSNSG SSVVYNKKKL 60 AAADNKLLFS SGPLKTSKGS EPEKQKESVF EYESSREIQV QNDSRATATL ETETDFSRDA 120 RAIRERVLKQ AEAALKGKNK SAGDEKLYKG LHGYTDYKAG FRREHTVSSE KAGGAHGPLR 180 ASAHIRVSAR FDYQPDICKD YKETGYCGYG DSCKFMHDRG DYKSGWQLEQ EWDEKEKVRA 240 RKMAMRNKGG DDDDDSPATS DEEDENALPF ACFICREPFV DAVVTKCKHY FCEHCALKHH 300 AKNKKCFVCN EPTYGIFNTA FEIRKRKAAE GK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01350.1 | 1e-156 | C3H family protein |