PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY62981.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB_related

Protein Properties

Length: 660aa MW: 70601 Da PI: 5.4116

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY62981.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25	4.4e-08	261	306	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH.HHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar.tmgkgRtlkqcksrwq 45 r +WT eEd +l v+ +G ++W+ Iar + + Rt+ ++ +rw+ TEY62981.1 261 RRSWTLEEDTKLTASVQNHGERNWENIARwDFKNDRTASELSHRWY 306 678*************************965557999999999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 660 aa Download sequence
MVDKSKKSTI SEDDMSAVLQ RYSLNTVLAL LQEVDQAAAG VKINWREVVK NSATGISGAR 60 EYQMLWRHLT YGEPLIDHLD NDAEPLDDDS DLEHEVEPLP AVGREASVEA AACVNVCPYS 120 VMDYWTLMLF VLDMVVVGLD ESLINYLYGP EFEPSHKLHM CWFIDLEMGI KLKVLIASGY 180 PNNPQLPNNS TIEAPLTINI PNTKAVCASS DDSHLSDIIR GTKNVTISVS VQKQPLSSGV 240 SGEKRPNNEV AEVNPPSRKR RRSWTLEEDT KLTASVQNHG ERNWENIARW DFKNDRTASE 300 LSHRWYILRK KQGNTKGGTS SQPPETQLAA AHRAMNLAID RPMSDNLKSV SHKATAGIKV 360 QHQTPKASAS PADQPFPRVG PSKPQILASR PSVNPISDTD SMIKAAAVAA GARIATPTDA 420 SSLIEAARSQ NVVHITTGSI GHQLPSNVHF IRNGLAKAPI STYSAPKPNI LGTGEGKPAQ 480 SRSTKPTASA ALSPTGAVPV SNAISVKESA ALPALPNPSA KLAVTAVDVV VSTLGNEIKE 540 LGKSIQRADQ AVVSGCLPVE QEPENRPVAS GNQSEEVGNS QPFSSGNALQ ENTGGDKDSV 600 SVSEPVSRET DDGIALPSLE VEQGKTNIDG QLTSEGTAEN TSTNVTSEDL PSTSKNGAAI

Sequence ? help Back to Top

Protein Sequence Length: 660 aa Download sequence

MVDKSKKSTI SEDDMSAVLQ RYSLNTVLAL LQEVDQAAAG VKINWREVVK NSATGISGAR  60
EYQMLWRHLT YGEPLIDHLD NDAEPLDDDS DLEHEVEPLP AVGREASVEA AACVNVCPYS  120
VMDYWTLMLF VLDMVVVGLD ESLINYLYGP EFEPSHKLHM CWFIDLEMGI KLKVLIASGY  180
PNNPQLPNNS TIEAPLTINI PNTKAVCASS DDSHLSDIIR GTKNVTISVS VQKQPLSSGV  240
SGEKRPNNEV AEVNPPSRKR RRSWTLEEDT KLTASVQNHG ERNWENIARW DFKNDRTASE  300
LSHRWYILRK KQGNTKGGTS SQPPETQLAA AHRAMNLAID RPMSDNLKSV SHKATAGIKV  360
QHQTPKASAS PADQPFPRVG PSKPQILASR PSVNPISDTD SMIKAAAVAA GARIATPTDA  420
SSLIEAARSQ NVVHITTGSI GHQLPSNVHF IRNGLAKAPI STYSAPKPNI LGTGEGKPAQ  480
SRSTKPTASA ALSPTGAVPV SNAISVKESA ALPALPNPSA KLAVTAVDVV VSTLGNEIKE  540
LGKSIQRADQ AVVSGCLPVE QEPENRPVAS GNQSEEVGNS QPFSSGNALQ ENTGGDKDSV  600
SVSEPVSRET DDGIALPSLE VEQGKTNIDG QLTSEGTAEN TSTNVTSEDL PSTSKNGAAI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	258	262	RKRRR
2	258	263	RKRRRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58220.1	7e-46	MYB_related family protein