PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY60965.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | C2H2 | ||||||||
Protein Properties | Length: 266aa MW: 29855.6 Da PI: 6.2986 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.2 | 0.00027 | 46 | 68 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C + F++ L H+++H TEY60965.1 46 YSCSFCRRDFRSAQALGGHMNVH 68 99*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 266 aa Download sequence |
MEEARYWMWA KTKPELAAYG DSWEEQAFAE DAAGALGGCV WPPRSYSCSF CRRDFRSAQA 60 LGGHMNVHRR DRARLKQSPS PTAPDILPQN PSQICTFLFN NPNPNPNQFP DSVPFVSPIP 120 HVIRVFSPPT EEKNTLNLRF LSSNVDKGEK GDKPPSWSSF LSEKRVDSVR NSEKKPAAAD 180 PDSRAEREDC VTEDLWMSLN LGGRRRETND EEVASCKRRR IEEKPLGLLS VVERCIPQPE 240 VMKLCSAGGG DELDLELRLG DAPKVK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 204 | 220 | RRRETNDEEVASCKRRR |
2 | 217 | 221 | KRRRI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17810.1 | 2e-26 | C2H2 family protein |