PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY60537.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | FAR1 | ||||||||
Protein Properties | Length: 249aa MW: 28327.9 Da PI: 7.2212 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 91.6 | 1e-28 | 83 | 170 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA++vGF +r+sk ++s+r+g+ + r +vC++eg+r ek++ k r+raetr+gC+a++ v+k ++gkw vtk+++eH+H+l+p TEY60537.1 83 FYNSYATRVGFVIRVSKLSRSRRDGTAIGRALVCNREGFRMGEKRE--KMVRQRAETRVGCRAMVLVRKGSSGKWTVTKFVKEHSHALTP 170 ******************************************9988..99*************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MDCEINGDVN GEVVGSSTDY QGGTDAIVRS SADGVLHRGL NIKVDEDSSE MELFELQDVD 60 CITPTDEPYV GQEFESEAAA HAFYNSYATR VGFVIRVSKL SRSRRDGTAI GRALVCNREG 120 FRMGEKREKM VRQRAETRVG CRAMVLVRKG SSGKWTVTKF VKEHSHALTP GKGRKDLIYD 180 QYPNEHDKIR ELSQQLATEK KKVATYKRHL EMVFEHIEEH NRSLGNKIQD IMNSVREMER 240 KEQVDPRLC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59470.2 | 3e-98 | FAR1 family protein |