PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY59251.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

Protein Properties

Length: 622aa MW: 70475.8 Da PI: 7.3101

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY59251.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	55.6	9.6e-18	264	354	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 f k l++s+v + ++ lp +f++ h ++++++lede+g+++ +k+i +k++ l++GW++Fv n+L egD+++F+l+ +f +v ++r TEY59251.1 264 FMKSLVRSHVASCFWMGLPGPFCKIHlP---GNDIEVILEDENGEEFPIKYIANKTG----LSAGWRKFVAGNKLVEGDVLIFQLTVPCRF--KVYIIR 353 89*******************77742...46789***********777776....*********************9765777..888877 PP S CS B3 99 k 99 + TEY59251.1 354 A 354 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 622 aa Download sequence
MKLKIVHQNQ ESRVGGEELE MKKEAVETAQ IREDRIPYFD PLLVSGKRKR KPKELIDEIS 60 PNFVRRRKSF SSSKSKDVRV PPFSCLKFKC SELVCWLIVL GFSVDLQLLV SPVLIGEDDM 120 QMDEEEEEEA VAGSNSRASE ELSLGKGMKW PRVHPILTIH LHHCHQLYQF HHNRNPRRGE 180 LEGGSLAEPR CGGGGRDYWE AAAFCGGWVF WRMRMLLRGV PDSGRRSRSK GDGGGSNSTV 240 QVKSPTMIRA EEFLLSLGSD QPSFMKSLVR SHVASCFWMG LPGPFCKIHL PGNDIEVILE 300 DENGEEFPIK YIANKTGLSA GWRKFVAGNK LVEGDVLIFQ LTVPCRFKVY IIRANDMNEV 360 DGALSLLILD SQTKQNDAAV DAQSKNKRRP KSLPIMVVQK KKQKAGPVGP QLGLLEEQSG 420 NDSDEVASEV LEGAKLSGSF HFKDVKNIEE FHIVVNGVCI DSDLPEDIHR KYYELCCSKN 480 SFLHDRLLPG LYSKLAAGMI VETINIADSI RGCKPTTPRK DFEVWEKSLR SFELLGLNVG 540 FIRSRLRELQ KLAFETEDSS EIRRFLEVQK EQSRIKDEIQ KLEAKIVEQR EVSAKCDEEI 600 EKLRSKKESF ELKFQVEVDA PW

Sequence ? help Back to Top

Protein Sequence Length: 622 aa Download sequence

MKLKIVHQNQ ESRVGGEELE MKKEAVETAQ IREDRIPYFD PLLVSGKRKR KPKELIDEIS  60
PNFVRRRKSF SSSKSKDVRV PPFSCLKFKC SELVCWLIVL GFSVDLQLLV SPVLIGEDDM  120
QMDEEEEEEA VAGSNSRASE ELSLGKGMKW PRVHPILTIH LHHCHQLYQF HHNRNPRRGE  180
LEGGSLAEPR CGGGGRDYWE AAAFCGGWVF WRMRMLLRGV PDSGRRSRSK GDGGGSNSTV  240
QVKSPTMIRA EEFLLSLGSD QPSFMKSLVR SHVASCFWMG LPGPFCKIHL PGNDIEVILE  300
DENGEEFPIK YIANKTGLSA GWRKFVAGNK LVEGDVLIFQ LTVPCRFKVY IIRANDMNEV  360
DGALSLLILD SQTKQNDAAV DAQSKNKRRP KSLPIMVVQK KKQKAGPVGP QLGLLEEQSG  420
NDSDEVASEV LEGAKLSGSF HFKDVKNIEE FHIVVNGVCI DSDLPEDIHR KYYELCCSKN  480
SFLHDRLLPG LYSKLAAGMI VETINIADSI RGCKPTTPRK DFEVWEKSLR SFELLGLNVG  540
FIRSRLRELQ KLAFETEDSS EIRRFLEVQK EQSRIKDEIQ KLEAKIVEQR EVSAKCDEEI  600
EKLRSKKESF ELKFQVEVDA PW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	47	68	KRKRKPKELIDEISPNFVRRRK
2	47	76	KRKRKPKELIDEISPNFVRRRKSFSSSKSK
3	48	69	KRKRKPKELIDEISPNFVRRRK
4	48	77	KRKRKPKELIDEISPNFVRRRKSFSSSKSK
5	49	70	KRKRKPKELIDEISPNFVRRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	1e-32	B3 family protein