PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY58075.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

FAR1

Protein Properties

Length: 750aa MW: 85619.4 Da PI: 6.7991

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY58075.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	65.6	1.3e-20	59	152	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY+++Ak++GFs+r+++++ + + it+r+f+C + g+++ + +++ k +r+r++tr+gC+a +++ k+ +w+vt +++ HnHel TEY58075.1 59 EFYCSFAKQCGFSIRRHRTRGKdGVGRGITRRDFTCHRGGYPQLKPTADGKIQRNRKSTRCGCQAYMRIVKRAdfnVPEWRVTGISNVHNHELL 152 6*************999887455667****************9***************98887676789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 750 aa Download sequence
MTEQTDILNE ASENGSESSR DDNGTIEEMP EDTILSRQTS VNLMPFIGQR FVSQDAAYEF 60 YCSFAKQCGF SIRRHRTRGK DGVGRGITRR DFTCHRGGYP QLKPTADGKI QRNRKSTRCG 120 CQAYMRIVKR ADFNVPEWRV TGISNVHNHE LLKFNEVQLL PAYCTMTPDD KSRICMYAKA 180 GMSVRQMLRL MELEKGIKLG CLPFSEIDIR NLLQSFRNVE RDHDPIDLLK MCKEKKDRDP 240 NFKYNYRIDS NNRLEHIAWS YASSIRLYET FGDVVVYDTT HRLDAYDMLF CVWIGVDSHG 300 SYCFFGCSLI RDENMQSFSW GLKTFLDFMN GKAPETILTD QKTCLKEALA MEMPGTKHAF 360 SIWHIISKFS DWFSVTLGSH YDSWKAEFHR LYNLHNVDEF EIGWGEMVDI YGLQGNKHIV 420 SLYAFRTYWA LPFLRSYFFA GMSNTFQSEM INSYIQRLLS AQSMLNDFVE QVASLLDARD 480 RGAKPKVLQK VPKTSLKTGA PIESHAATVL TPYAFGKLQE ELVLAPQYAT MLVDDSYFIV 540 RHHTGVDGGY KVLWVPQDEF ITCSCCHFEF SGILCRHILR VLSTNNCFQI PDQYLPLRWR 600 DSLFSKPAPT SSGKVQLLQS MISSLITESM ESEDRLNVAC DHIALVLARI KNFPSAATDD 660 SNGVAYTSPS GSFILPDVED SDAIAQSFST NPHECLAFAK LKDRRTRDEI DVYRKKRRCT 720 VPCCGQYGHE IGNCPMVADD DLNADGLGFL

Sequence ? help Back to Top

Protein Sequence Length: 750 aa Download sequence

MTEQTDILNE ASENGSESSR DDNGTIEEMP EDTILSRQTS VNLMPFIGQR FVSQDAAYEF  60
YCSFAKQCGF SIRRHRTRGK DGVGRGITRR DFTCHRGGYP QLKPTADGKI QRNRKSTRCG  120
CQAYMRIVKR ADFNVPEWRV TGISNVHNHE LLKFNEVQLL PAYCTMTPDD KSRICMYAKA  180
GMSVRQMLRL MELEKGIKLG CLPFSEIDIR NLLQSFRNVE RDHDPIDLLK MCKEKKDRDP  240
NFKYNYRIDS NNRLEHIAWS YASSIRLYET FGDVVVYDTT HRLDAYDMLF CVWIGVDSHG  300
SYCFFGCSLI RDENMQSFSW GLKTFLDFMN GKAPETILTD QKTCLKEALA MEMPGTKHAF  360
SIWHIISKFS DWFSVTLGSH YDSWKAEFHR LYNLHNVDEF EIGWGEMVDI YGLQGNKHIV  420
SLYAFRTYWA LPFLRSYFFA GMSNTFQSEM INSYIQRLLS AQSMLNDFVE QVASLLDARD  480
RGAKPKVLQK VPKTSLKTGA PIESHAATVL TPYAFGKLQE ELVLAPQYAT MLVDDSYFIV  540
RHHTGVDGGY KVLWVPQDEF ITCSCCHFEF SGILCRHILR VLSTNNCFQI PDQYLPLRWR  600
DSLFSKPAPT SSGKVQLLQS MISSLITESM ESEDRLNVAC DHIALVLARI KNFPSAATDD  660
SNGVAYTSPS GSFILPDVED SDAIAQSFST NPHECLAFAK LKDRRTRDEI DVYRKKRRCT  720
VPCCGQYGHE IGNCPMVADD DLNADGLGFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein