PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY57774.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

FAR1

Protein Properties

Length: 560aa MW: 64834.2 Da PI: 7.3186

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY57774.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	49.9	1.1e-15	32	98	17	88
FAR1 17 skskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 ++++ ++++e ++ ++ Cs g++++++ + r+r+etrtgC a++k +++++++w+++++eleHnH TEY57774.1 32 KQHTWYRKSKERYRGKLSCSSAGFKKKTDAN-----RPRPETRTGCPAMIKFRLMDNKRWRIIEIELEHNHL 98 223333678889999*********99888.....*********************************5 PP

Sequence ? help Back to Top
Protein Sequence Length: 560 aa Download sequence
MLDKVVRFYK VIVGMEFESY DDVYFFYNCY AKQHTWYRKS KERYRGKLSC SSAGFKKKTD 60 ANRPRPETRT GCPAMIKFRL MDNKRWRIIE IELEHNHLTT PANANIYKSH KISDPGSKRP 120 LPINGAVQVQ TIRLFRTVVI DADDTEECGF GDTIDQGDDK LKLKLGDSQA MLKFFTRMQL 180 NDASFFYSMD INEKGCLRNV FWAEARCRAA YSYFVDVLFV NTTSLTENYE VPLVVFTGIN 240 HHAQTVPLGC GLVSVQTVES FVWLCRAWLT YMVGQSPQTI ITIECKAMQT AVTEVHPRAS 300 HCLSLTNIMK MVLHEVACLE ACEAIRNGLS RAVYHSLRSD EFEAAWEDLV QSHGLQNHKW 360 LQNLYEDRKR WVPVYLKEIF CAGMFPVDSP FQEYLRQHTS LREFFSSYDQ AQQDIHHRET 420 LSDIASNKSS CLLKTRLFFE LQLSKLYTKN IFEHFQQEVE GVYSCYGLRQ KSVEGSVVTF 480 IVKEDVQVEE NMKETRDFEV IYNSGDAVEV LCVCALFNLR GYLCRHVLCV INQVGLDEIP 540 PQYILAQERY KGGRGRKEIT

Sequence ? help Back to Top

Protein Sequence Length: 560 aa Download sequence

MLDKVVRFYK VIVGMEFESY DDVYFFYNCY AKQHTWYRKS KERYRGKLSC SSAGFKKKTD  60
ANRPRPETRT GCPAMIKFRL MDNKRWRIIE IELEHNHLTT PANANIYKSH KISDPGSKRP  120
LPINGAVQVQ TIRLFRTVVI DADDTEECGF GDTIDQGDDK LKLKLGDSQA MLKFFTRMQL  180
NDASFFYSMD INEKGCLRNV FWAEARCRAA YSYFVDVLFV NTTSLTENYE VPLVVFTGIN  240
HHAQTVPLGC GLVSVQTVES FVWLCRAWLT YMVGQSPQTI ITIECKAMQT AVTEVHPRAS  300
HCLSLTNIMK MVLHEVACLE ACEAIRNGLS RAVYHSLRSD EFEAAWEDLV QSHGLQNHKW  360
LQNLYEDRKR WVPVYLKEIF CAGMFPVDSP FQEYLRQHTS LREFFSSYDQ AQQDIHHRET  420
LSDIASNKSS CLLKTRLFFE LQLSKLYTKN IFEHFQQEVE GVYSCYGLRQ KSVEGSVVTF  480
IVKEDVQVEE NMKETRDFEV IYNSGDAVEV LCVCALFNLR GYLCRHVLCV INQVGLDEIP  540
PQYILAQERY KGGRGRKEIT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-167	FAR1 family protein