PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY56689.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 473aa MW: 51369.8 Da PI: 8.9691

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY56689.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.6	1.1e-05	6	28	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k F r nL+ H r H TEY56689.1 6 FVCEVCNKGFQREQNLQLHRRGH 28 89*******************88 PP
2	zf-C2H2	11.2	0.0012	82	104	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC++C+k + +s+ k H +t+ TEY56689.1 82 YKCEKCSKKYAVHSDWKAHSKTC 104 9******************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
MATNRFVCEV CNKGFQREQN LQLHRRGHNL PWKLRQKSTK EVRRKVYLCP EPSCVHHDPA 60 RALGDLTGIK KHYSRKHGEK KYKCEKCSKK YAVHSDWKAH SKTCGTREYR CDCGTLFSRR 120 DSFITHRAFC DALAQESARN LNSPSLSSIG SHLLGLSQHD QMNQGSLSSH DILRLGRPGQ 180 QYETLVSPGG FRPSPRGLFL HPNHDHDHQD HQNQSPHNSM LPNKSSLQSL MQLPHLHMNN 240 TANTSSNSSS AGLFNLSFFP GSNNNNAAST IDSGAHHSAA GDDSTLFSSG NLMSIAIPSL 300 YSTSQAMQTP SGGQMSATAL LQKAAQMGST ATNNGGASLS LLKSFGKSPD HHSFGGSGVY 360 GGSNSGGGNH LHDLMMNSIA AAEGGSAASM FEQAEMEEYR GFHGGNSNSQ QSGFSSLEQA 420 GRLTRDFLGV GEIVRSMREQ QQQQQSGMDH LGSLDLQGKT TSHTQPFGGG SFQ

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

MATNRFVCEV CNKGFQREQN LQLHRRGHNL PWKLRQKSTK EVRRKVYLCP EPSCVHHDPA  60
RALGDLTGIK KHYSRKHGEK KYKCEKCSKK YAVHSDWKAH SKTCGTREYR CDCGTLFSRR  120
DSFITHRAFC DALAQESARN LNSPSLSSIG SHLLGLSQHD QMNQGSLSSH DILRLGRPGQ  180
QYETLVSPGG FRPSPRGLFL HPNHDHDHQD HQNQSPHNSM LPNKSSLQSL MQLPHLHMNN  240
TANTSSNSSS AGLFNLSFFP GSNNNNAAST IDSGAHHSAA GDDSTLFSSG NLMSIAIPSL  300
YSTSQAMQTP SGGQMSATAL LQKAAQMGST ATNNGGASLS LLKSFGKSPD HHSFGGSGVY  360
GGSNSGGGNH LHDLMMNSIA AAEGGSAASM FEQAEMEEYR GFHGGNSNSQ QSGFSSLEQA  420
GRLTRDFLGV GEIVRSMREQ QQQQQSGMDH LGSLDLQGKT TSHTQPFGGG SFQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	2e-84	C2H2 family protein