PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY55244.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

ARF

Protein Properties

Length: 1109aa MW: 123865 Da PI: 6.6445

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY55244.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	66.3	4.6e-21	126	251	1	99
EEEE-..-HHHHTT-EE--HHH.HTT...............................---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHH CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh...............................ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeF 68 f+k+lt sd++++g +++p++ ae++ + +++ ++lt +d++ ++W++++iyr++++r++lt+GW+ F TEY55244.1 126 FCKTLTASDTSTHGGFSVPRRAAEKIfpplvslitidavinlfdlnltrdsflqdfsM-QPPA-QELTAKDLHDQTWTFRHIYRGQPKRHLLTTGWSVF 222 99*******************************************99999999954.4444.48***************************** PP HHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 69 vkangLkegDfvvFkldgrsefelvvkvfrk 99 v++++L +gD v+F ++++ +l+++++r+ TEY55244.1 223 VSSKRLVTGDAVLFI--RDEKSQLLLGIRRA 251 *************..45677789999997 PP
2	Auxin_resp	125.1	4.8e-41	276	358	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+++YnPrastseFv++++k++ka++++vs+GmRf+m+fete+s rr++Gtv+g+sdldpvrW+nS+Wr+L+ TEY55244.1 276 AAHAAANNSPFTIFYNPRASTSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTVTGMSDLDPVRWKNSQWRNLQ 358 79*******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1109 aa Download sequence
MKIPSNGFLA NTAEGEKKVT NSELWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKE 60 ADGIPSYPNL PSKLICMLHN VTLHADAETD EVYAQMTLLP VTKYDQEALL VSDIGLKHNR 120 QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLVSLIT IDAVINLFDL NLTRDSFLQD 180 FSMQPPAQEL TAKDLHDQTW TFRHIYRGQP KRHLLTTGWS VFVSSKRLVT GDAVLFIRDE 240 KSQLLLGIRR ANRQQPALSS SVISSDSMHI GILAAAAHAA ANNSPFTIFY NPRASTSEFV 300 IPLAKYNKAM YTQVSLGMRF RMMFETEESG VRRYMGTVTG MSDLDPVRWK NSQWRNLQVG 360 WDESTARECP SRVSIWDIEP VVTPFYICPP PFYRPKLARH PGFPDDSDVE NMFKRGMPWL 420 ADDFGLKDAS SSIFPGLSLV QWMNMQQNNQ LSSNQPGLYP NMVTSGALQG NLGSDDPSKL 480 LNFRSPGVAS QNLQMSKGNH QNQPANQLLQ SNAPWSQQQM LQSPTPAQQP QQQQLPMQQM 540 QPQMLQPTQQ QQLLQQTQQH QHQQSQSMLM PPVMSSMSSE QQAASRNLQQ TAAYSQLQQQ 600 QQQQMQQQQQ QHDVSSSRTT FPATSLTQDL PFQPHVEQPS TLLQRSQEQH QMQFQQGTLH 660 RIQQNLSQRP VIQQTTTQQN LSDQQLQMQF LQKLQQQQQQ QQQMSGPLNP MMEPQMPQKQ 720 QVQQSQQTQH LSAPMQQQSN GNCFSASTLL QSPQFQTNQF HIQQKTPPLA RQQSSHTDGD 780 APSCSTSPSK INTHSLQPSF AKSQTGQPGM LDTTIVHPSN LVQESHNKLD PRIKHESAHS 840 KAPEQQPKFK INAADHMDVT SSATSYCLDA GSLQQSFPLT GLDGDVKSHT RNGLPFAAAI 900 DGLAPDALLS RGFDSDKDIQ NLLSNYSGTP RDIETDLSSG INSQSFGVPN MSFKPGSSND 960 AALNETGVMN GGLWPNQAQR MRTYTKVQKR GSVGRTIDVN RYKGYDELRN DLARMFGIEG 1020 LLEDPQRTEW KLVYVDHEND ILLVGDDPWE EFVSCVQSIK ILSAAEVQQM SLDGDLAQLP 1080 VANQACSGTD SGNVWRAHYD DNSATSFNR

Sequence ? help Back to Top

Protein Sequence Length: 1109 aa Download sequence

MKIPSNGFLA NTAEGEKKVT NSELWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKE  60
ADGIPSYPNL PSKLICMLHN VTLHADAETD EVYAQMTLLP VTKYDQEALL VSDIGLKHNR  120
QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLVSLIT IDAVINLFDL NLTRDSFLQD  180
FSMQPPAQEL TAKDLHDQTW TFRHIYRGQP KRHLLTTGWS VFVSSKRLVT GDAVLFIRDE  240
KSQLLLGIRR ANRQQPALSS SVISSDSMHI GILAAAAHAA ANNSPFTIFY NPRASTSEFV  300
IPLAKYNKAM YTQVSLGMRF RMMFETEESG VRRYMGTVTG MSDLDPVRWK NSQWRNLQVG  360
WDESTARECP SRVSIWDIEP VVTPFYICPP PFYRPKLARH PGFPDDSDVE NMFKRGMPWL  420
ADDFGLKDAS SSIFPGLSLV QWMNMQQNNQ LSSNQPGLYP NMVTSGALQG NLGSDDPSKL  480
LNFRSPGVAS QNLQMSKGNH QNQPANQLLQ SNAPWSQQQM LQSPTPAQQP QQQQLPMQQM  540
QPQMLQPTQQ QQLLQQTQQH QHQQSQSMLM PPVMSSMSSE QQAASRNLQQ TAAYSQLQQQ  600
QQQQMQQQQQ QHDVSSSRTT FPATSLTQDL PFQPHVEQPS TLLQRSQEQH QMQFQQGTLH  660
RIQQNLSQRP VIQQTTTQQN LSDQQLQMQF LQKLQQQQQQ QQQMSGPLNP MMEPQMPQKQ  720
QVQQSQQTQH LSAPMQQQSN GNCFSASTLL QSPQFQTNQF HIQQKTPPLA RQQSSHTDGD  780
APSCSTSPSK INTHSLQPSF AKSQTGQPGM LDTTIVHPSN LVQESHNKLD PRIKHESAHS  840
KAPEQQPKFK INAADHMDVT SSATSYCLDA GSLQQSFPLT GLDGDVKSHT RNGLPFAAAI  900
DGLAPDALLS RGFDSDKDIQ NLLSNYSGTP RDIETDLSSG INSQSFGVPN MSFKPGSSND  960
AALNETGVMN GGLWPNQAQR MRTYTKVQKR GSVGRTIDVN RYKGYDELRN DLARMFGIEG  1020
LLEDPQRTEW KLVYVDHEND ILLVGDDPWE EFVSCVQSIK ILSAAEVQQM SLDGDLAQLP  1080
VANQACSGTD SGNVWRAHYD DNSATSFNR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein