PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY53860.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 1261aa MW: 141273 Da PI: 8.8122

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY53860.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.2	0.00026	1170	1192	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 Cp Cgk F ++ +L++H r+H TEY53860.1 1170 CPvkGCGKKFFSHKYLVQHRRVH 1192 9999*****************99 PP
2	zf-C2H2	12.5	0.00045	1228	1254	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C+ Cg++F+ s++ rH r+ H TEY53860.1 1228 YVCTeaGCGQTFRFVSDFSRHKRKtgH 1254 99********************99666 PP

Sequence ? help Back to Top
Protein Sequence Length: 1261 aa Download sequence
MAVESSAAGN IEVSPWLKSM AVAPEYHPSL AEFQDPIAYI FKIEKEASKY GICKIVPPVP 60 AAPRKTVVSN LNKSLVARSE SGPTFTTRQQ QVGFCPRKHR PAQKPVWQSG ERYTLAEFEA 120 KARNFEKNHL KKYAKKVLSA LDIETLYWNA MVDKPLSVEY ANDMPGSAFV VNKGGGKKSE 180 GAMTVGETEW NMRRLPRENL SLLRFMKEEI PGVTSPMVYV AMMFSWFAWH VEDHDLHSMN 240 YLHLGSGKTW YGVPKEAAVA FEEVIREHGY GGEINPLVTF ATLGEKTTVM SPEVLLNAGV 300 PCCRLVQNAG EFVVTFPRAY HSGFSHGFNC GEAANIATPE WLRVAKEAAI RRAAINCPPM 360 VSHFQLLYDL ALSLCSRLGH IVFSTLGSSV PKSIAVEPRS SRLRDRKRGE GETLIKEQFF 420 QDMIQNNDML RSLGQGSSVL LLPQNALSYS FRSKTVVGFQ PTTKSKLFPS LCSPDLELRN 480 TGFSSHDEST LERSQSPKQA RSSVANKRTF SSLFGINIPS PAPDAEQQYS ASKKASQCQQ 540 GLFSCVTCGI LCFACVAIVQ PKEVTVQYLM SADYSILQNL GESDNEGANT NLSLGLMHMN 600 SQNNRSASDS DVRNEPSSLG LLALAYGGSL DSEDEDCEVN NDPIEGCGTS KSDDFRYGDA 660 CEKTEAKINC RKEISYEFDR NNSSMIESNS LTNRFSRHQT EPQFDIPDSL TCKAVGTPRS 720 GLAPQQPTTM PFVPRLDEDS SRLHVFCLQH AMQVCQRLSQ LGGADVFLVC HPDYPKLESQ 780 AKKVAEELNS DYIWNEVSFR EATDEDEEIL RRALESENAI HGNGDWAVKM GLNLFYSANL 840 SRSPLYSKQM HYNSVIYNAF GRSSTTDRST SEGELEGRVL GRQRKIIVAG KWCGKVWMSN 900 QAHPLLVNKD SQEQEQEPAI ASWTKPDVKY VRRSECSSLA AGKLSAVRKT SRKKTSNAES 960 CSFMEEKSPE AEKSDKSRSF YCHKKIKRKH GSRMPKEDTP EVENQDESSE KSQLQHGTKR 1020 LKKENLEDEY DSLEEEYPLS KSWKQIKSNL RARQKEKETS DAAKNQKKGK TEESNSHNVD 1080 EMEGGPSTRL RKRTKKPSKD SGARMTKPKP VVKKQQRDTT TKNTPAGKAP TSSNKGKTRD 1140 EEAEYACDFE GCAMSFCSKQ ELVLHKKNIC PVKGCGKKFF SHKYLVQHRR VHMEDRPLKC 1200 PWKGCKMTFK WAWARTEHIR VHTGARPYVC TEAGCGQTFR FVSDFSRHKR KTGHAPKKAR 1260 G

Sequence ? help Back to Top

Protein Sequence Length: 1261 aa Download sequence

MAVESSAAGN IEVSPWLKSM AVAPEYHPSL AEFQDPIAYI FKIEKEASKY GICKIVPPVP  60
AAPRKTVVSN LNKSLVARSE SGPTFTTRQQ QVGFCPRKHR PAQKPVWQSG ERYTLAEFEA  120
KARNFEKNHL KKYAKKVLSA LDIETLYWNA MVDKPLSVEY ANDMPGSAFV VNKGGGKKSE  180
GAMTVGETEW NMRRLPRENL SLLRFMKEEI PGVTSPMVYV AMMFSWFAWH VEDHDLHSMN  240
YLHLGSGKTW YGVPKEAAVA FEEVIREHGY GGEINPLVTF ATLGEKTTVM SPEVLLNAGV  300
PCCRLVQNAG EFVVTFPRAY HSGFSHGFNC GEAANIATPE WLRVAKEAAI RRAAINCPPM  360
VSHFQLLYDL ALSLCSRLGH IVFSTLGSSV PKSIAVEPRS SRLRDRKRGE GETLIKEQFF  420
QDMIQNNDML RSLGQGSSVL LLPQNALSYS FRSKTVVGFQ PTTKSKLFPS LCSPDLELRN  480
TGFSSHDEST LERSQSPKQA RSSVANKRTF SSLFGINIPS PAPDAEQQYS ASKKASQCQQ  540
GLFSCVTCGI LCFACVAIVQ PKEVTVQYLM SADYSILQNL GESDNEGANT NLSLGLMHMN  600
SQNNRSASDS DVRNEPSSLG LLALAYGGSL DSEDEDCEVN NDPIEGCGTS KSDDFRYGDA  660
CEKTEAKINC RKEISYEFDR NNSSMIESNS LTNRFSRHQT EPQFDIPDSL TCKAVGTPRS  720
GLAPQQPTTM PFVPRLDEDS SRLHVFCLQH AMQVCQRLSQ LGGADVFLVC HPDYPKLESQ  780
AKKVAEELNS DYIWNEVSFR EATDEDEEIL RRALESENAI HGNGDWAVKM GLNLFYSANL  840
SRSPLYSKQM HYNSVIYNAF GRSSTTDRST SEGELEGRVL GRQRKIIVAG KWCGKVWMSN  900
QAHPLLVNKD SQEQEQEPAI ASWTKPDVKY VRRSECSSLA AGKLSAVRKT SRKKTSNAES  960
CSFMEEKSPE AEKSDKSRSF YCHKKIKRKH GSRMPKEDTP EVENQDESSE KSQLQHGTKR  1020
LKKENLEDEY DSLEEEYPLS KSWKQIKSNL RARQKEKETS DAAKNQKKGK TEESNSHNVD  1080
EMEGGPSTRL RKRTKKPSKD SGARMTKPKP VVKKQQRDTT TKNTPAGKAP TSSNKGKTRD  1140
EEAEYACDFE GCAMSFCSKQ ELVLHKKNIC PVKGCGKKFF SHKYLVQHRR VHMEDRPLKC  1200
PWKGCKMTFK WAWARTEHIR VHTGARPYVC TEAGCGQTFR FVSDFSRHKR KTGHAPKKAR  1260
G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	0.0	C2H2 family protein