PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY53710.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 365aa MW: 40917.1 Da PI: 8.9603

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY53710.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	21.1	7.9e-07	55	75	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C+ Cgk+F+++ L H++ H TEY53710.1 55 CKECGKTFPSWKALFGHMKWH 75 *******************98 PP
2	zf-C2H2	11.1	0.0013	290	312	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp C k+F++ L H ++H TEY53710.1 290 HECPVCFKVFPSGQALGGHKKSH 312 79**************9999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MEKEHICKFC SKSFPCGRSL GGHMRSHLIN NTPPLGHHPE TRPLKKKLPP LTMACKECGK 60 TFPSWKALFG HMKWHSPNNG GVLVMDSQSD NEAGTTPPCK RKRSDRTITT RYNNNTSITN 120 SSSSLTIATT TTEINDDDQH NEQEEVALSL IILSRDKSYW GDIEGKNSKL DPKSIGVESL 180 QKLKPPRVET KTRKLESLNN ETEVRFDEFE VNSPKKLIKR RHHDQFGRER EASREGNSNS 240 KFRCSICKKD FRSYQALGGH RASHKKFKGC CAPRSSLETE DSHSQKSKEH ECPVCFKVFP 300 SGQALGGHKK SHLIADQAKA SPPHQTADRA SLDLNLPAPT EEEECGEFEP WWIGGASRIG 360 LLSTS

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MEKEHICKFC SKSFPCGRSL GGHMRSHLIN NTPPLGHHPE TRPLKKKLPP LTMACKECGK  60
TFPSWKALFG HMKWHSPNNG GVLVMDSQSD NEAGTTPPCK RKRSDRTITT RYNNNTSITN  120
SSSSLTIATT TTEINDDDQH NEQEEVALSL IILSRDKSYW GDIEGKNSKL DPKSIGVESL  180
QKLKPPRVET KTRKLESLNN ETEVRFDEFE VNSPKKLIKR RHHDQFGRER EASREGNSNS  240
KFRCSICKKD FRSYQALGGH RASHKKFKGC CAPRSSLETE DSHSQKSKEH ECPVCFKVFP  300
SGQALGGHKK SHLIADQAKA SPPHQTADRA SLDLNLPAPT EEEECGEFEP WWIGGASRIG  360
LLSTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45120.1	1e-27	C2H2 family protein