PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AT2G45120.1
Common NameT14P1.7, ZAT4
Organism
Arabidopsis thaliana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Family C2H2
Protein Properties Length: 314aa    MW: 35853.6 Da    PI: 4.9948
Description C2H2-like zinc finger protein
Gene Model
Gene Model ID Type Source Coding Sequence
AT2G45120.1genomeTAIRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.70.00037426123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 ykC  C ksF +   L  H+r+H
  AT2G45120.1  4 YKCRFCFKSFINGRALGGHMRSH 26
                 9*********************9 PP
2zf-C2H215.45.3e-05194216123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  +kC+ Cgk+F++   L  H  +H
  AT2G45120.1 194 FKCETCGKVFKSYQALGGHRASH 216
                  89***********9999998887 PP
3zf-C2H2120.00063243265123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  ++Cp+C ++F++   L  H r+H
  AT2G45120.1 243 HECPICFRVFTSGQALGGHKRSH 265
                  79******************999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576677.69E-9326No hitNo description
PfamPF139127.4E-4327IPR007087Zinc finger, C2H2
SMARTSM003550.036426IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.93426IPR007087Zinc finger, C2H2
PROSITE patternPS000280626IPR007087Zinc finger, C2H2
SuperFamilySSF576677.69E-9189216No hitNo description
PfamPF139122.0E-11193218IPR007087Zinc finger, C2H2
SMARTSM003550.013194216IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015711.655194221IPR007087Zinc finger, C2H2
PROSITE patternPS000280196216IPR007087Zinc finger, C2H2
PfamPF139124.6E-11242265IPR007087Zinc finger, C2H2
PROSITE profilePS501579.182243265IPR007087Zinc finger, C2H2
SMARTSM003550.15243265IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280245265IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0000293anatomyguard cell
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    Send to blast
MERYKCRFCF KSFINGRALG GHMRSHMLTL SAERCVITGE AEEEVEERPS QLCDDDDDTE  60
SDASSSSGEF DNQKMNRLDD ELEFDFAEDD DVESETESSR INPTRRRSKR TRKLGSFDFD  120
FEKLTTSQPS ELVAEPEHHS SASDTTTEED LAFCLIMLSR DKWKQQKKKK QRVEEDETDH  180
DSEDYKSSKS RGRFKCETCG KVFKSYQALG GHRASHKKNK ACMTKTEQVE TEYVLGVKEK  240
KVHECPICFR VFTSGQALGG HKRSHGSNIG AGRGLSVSQI VQIEEEVSVK QRMIDLNLPA  300
PNEEDETSLV FDEW
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
At.370090.0inflorescence
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO425699250.0
Genevisible266133_at0.0
Expression AtlasAT2G45120-
AtGenExpressAT2G45120-
ATTED-IIAT2G45120-
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in stress responses. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAT2G45120.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Phenotype -- Mutation ? help Back to Top
Source ID
T-DNA ExpressAT2G45120
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY0746550.0AY074655.1 Arabidopsis thaliana At2g45120/T14P1.7 mRNA, complete cds.
GenBankCP0026850.0CP002685.1 Arabidopsis thaliana chromosome 2, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_182037.10.0C2H2-like zinc finger protein
SwissprotQ9SHD00.0ZAT4_ARATH; Zinc finger protein ZAT4
TrEMBLA0A178VYN40.0A0A178VYN4_ARATH; Uncharacterized protein
STRINGAT2G45120.10.0(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM14652893
Representative plantOGRP24041030
Publications ? help Back to Top
  1. Riechmann JL, et al.
    Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.
    Science, 2000. 290(5499): p. 2105-10
    [PMID:11118137]
  2. Yamada K, et al.
    Empirical analysis of transcriptional activity in the Arabidopsis genome.
    Science, 2003. 302(5646): p. 842-6
    [PMID:14593172]
  3. Englbrecht CC,Schoof H,B
    Conservation, diversification and expansion of C2H2 zinc finger proteins in the Arabidopsis thaliana genome.
    BMC Genomics, 2004. 5(1): p. 39
    [PMID:15236668]
  4. Juenger TE, et al.
    Natural genetic variation in whole-genome expression in Arabidopsis thaliana: the impact of physiological QTL introgression.
    Mol. Ecol., 2006. 15(5): p. 1351-65
    [PMID:16626458]
  5. Mittler R, et al.
    Gain- and loss-of-function mutations in Zat10 enhance the tolerance of plants to abiotic stress.
    FEBS Lett., 2006. 580(28-29): p. 6537-42
    [PMID:17112521]