PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY52343.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | YABBY | ||||||||
Protein Properties | Length: 186aa MW: 20791.7 Da PI: 9.0716 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 224.5 | 2.9e-69 | 3 | 160 | 3 | 170 |
YABBY 3 vfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssekl 101 + ++e vCyv+Cn+Cntilav+vP+ s+f++vtvrCGhC++llsvn+ q + ++ +l+++++ +++ ++++ +s++ + + TEY52343.1 3 MELTAEPVCYVNCNYCNTILAVNVPFGSMFSIVTVRCGHCSNLLSVNMGALLQSVHLQDF--------QLQKQHSFAASVNAAATRDNGSSSKCNRYG- 92 6678999**************************************999988877766664........455555556666666666666666665554. PP YABBY 102 senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 s + + e p++pp irPPekrqrv saynrfikeeiqrikasnPdishreafs+aaknWahfP+ihfgl TEY52343.1 93 SPHVHTEQPKMPP-IRPPEKRQRVLSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGL 160 7888899999999.9****************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence |
MSMELTAEPV CYVNCNYCNT ILAVNVPFGS MFSIVTVRCG HCSNLLSVNM GALLQSVHLQ 60 DFQLQKQHSF AASVNAAATR DNGSSSKCNR YGSPHVHTEQ PKMPPIRPPE KRQRVLSAYN 120 RFIKEEIQRI KASNPDISHR EAFSTAAKNW AHFPHIHFGL KMESNKQAKL DHPVAEEATP 180 QKSLGF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08465.1 | 7e-76 | YABBY family protein |