PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY52248.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 221aa MW: 24434.2 Da PI: 8.3954

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY52248.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.7	0.00038	79	101	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H TEY52248.1 79 YQCKTCTRTFPSFQALGGHRASH 101 9***********99999998887 PP
2	zf-C2H2	14.2	0.00013	144	166	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs+ L H+r+H TEY52248.1 144 HECSICGSEFSSGQALGGHMRRH 166 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 221 aa Download sequence
MKNSQIMEEL SPSNDHIIAK GKRTKRPRPS SSSSSSDVTS NFSPTTSTGI STSTEEDEDL 60 ANCLILLARG NRKHGDNVYQ CKTCTRTFPS FQALGGHRAS HKKPKPSAQF YPPPERAESE 120 EEEEESKFVK INTITLSPSR PKIHECSICG SEFSSGQALG GHMRRHRSNS SHRDHQKARN 180 MLSLDLNLPA PLEEAEFHAF SSGQKPRLVF AAAAPLVDCH Y

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	25	29	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03510.1	1e-34	C2H2 family protein