PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY52198.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 242aa MW: 26886.4 Da PI: 5.9755 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 70.5 | 1.4e-22 | 22 | 69 | 1 | 48 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklye 48 k+ien snrqvtfskRr g++KKA+EL+vLC+ae+a+++ s +++ TEY52198.1 22 KKIENLSNRQVTFSKRRLGLFKKASELCVLCGAEIAIVVHSLGKRVFS 69 68*************************************997777665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MVILKESGGK KTTQGRKKIE IKKIENLSNR QVTFSKRRLG LFKKASELCV LCGAEIAIVV 60 HSLGKRVFSF GHPSPEAVID RYLGGEREVG AAPAVNTREF NRHYSDVSNQ LELEKQRRDL 120 IEEAKRAEGY GGGGGDVFWW HQGVEEMELN ELEQYAEALD ELLKNVELRT KDLMISHLLP 180 PSVASASASL TMHNPTATAF DDAAAAGLYV AQNQMGNNFD YENFIAPNQG LDMVTSPAWL 240 NY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24840.1 | 2e-38 | M-type_MADS family protein |