PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY51749.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB

Protein Properties

Length: 263aa MW: 28463 Da PI: 8.9621

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY51749.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.9	1.3e-19	13	58	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++e+d +l ++v+q+G ++W++I++ ++ gR++k+c++rw + TEY51749.1 13 KGPWSPEDDARLRELVQQHGARNWSLISKSIP-GRSGKSCRLRWCNQ 58 79****************************.*********985 PP
2	Myb_DNA-binding	52.8	8.9e-17	67	109	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEd ++++a+++ G++ W+tIar ++ gRt++ +k++w++ TEY51749.1 67 PFTAEEDAIILRAHAEIGNK-WATIARQLN-GRTDNAIKNHWNST 109 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 263 aa Download sequence
MAAGKSDAGD RIKGPWSPED DARLRELVQQ HGARNWSLIS KSIPGRSGKS CRLRWCNQLS 60 PVVAHRPFTA EEDAIILRAH AEIGNKWATI ARQLNGRTDN AIKNHWNSTL KRKFSGGGGE 120 DRRSQVLRRD GSGDVSTAMA KLSNPIDGSR SGSGSGSGSS RSDSDISDSG YDLTEFSFPV 180 ATTAAAVAAP LEDCDSEFTA LSLRLPGVSS ADPAVDKEAL CSKFPMKMKS ETLNPELIAV 240 MQEMIKAEVR NYITGGREIM RLR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G67300.1	8e-61	MYB family protein