PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY50204.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | TCP | ||||||||
Protein Properties | Length: 156aa MW: 16929.6 Da PI: 11.5256 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 48 | 4.8e-15 | 102 | 150 | 24 | 72 |
TCP 24 lsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssase 72 ++a+ aar+F+L+ eLG+ +d++ti WLl qa p+ + tg+++ +a++ TEY50204.1 102 IPALSAARIFQLTCELGLRSDGETIKWLLHQADPSTVATTGSGTVPAES 150 799***************************************9998854 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 156 aa Download sequence |
MSQHDQQGIT TRRVFKAIVT KILTGPLNAR ICPNTCKSGP KARSHTPQGP ARFPIIKMWG 60 QVSSLPLSPS SPPPRATARH RLKKPDYQIR RLRPRSAAAA EIPALSAARI FQLTCELGLR 120 SDGETIKWLL HQADPSTVAT TGSGTVPAES VVSSYL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47620.1 | 9e-14 | TCP family protein |