| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 136.7 | 2e-42 | 111 | 289 | 2 | 135 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt................................ss 67
+ k+ +++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+p+++++tgt ++
AT3G47620.1 111 PLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTgtipanftslnislrssgssmslpshfrsaasTF 208
57999***********************************************************6666666666666666666665555555555444 PP
TCP 68 ssaseceaesssssasnsssg...........kaaksaa.kskksqksaasalnlakesrakararare.rtrekmriknk 135
s+++ +++++ ++++++++ g +a +s+ ++ ++ ++++s+ln+++ ++++ +++++e ++++k ri++
AT3G47620.1 209 SPNNIFSPAMLQQQQQQQRGGgvgfhhphlqgRAPTSSLfPGIDNFTPTTSFLNFHNPTKQEGDQDSEElNSEKKRRIQTT 289
44444455555555555555599999*****988899999*****************************888888888865 PP
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| TAIR | Encodes a transcription factor AtTCP14 that regulates seed germination. AtTCP14 shows elevated expression level just prior to germination. AtTCP14 is predominantly expressed in the vascular tissue of the embryo, and affects gene expression in radicles in a non-cell-autonomous manner. |
| UniProt | Transcription factor involved the regulation of plant development. Together with TCP15, modulates plant stature by promoting cell division in young internodes. Represses cell proliferation in leaf and floral tissues (PubMed:21668538). Together with TCP15, acts downstream of gibberellin (GA), and the stratification pathways that promote seed germination. Involved in the control of cell proliferation at the root apical meristem (RAM) by regulating the activity of CYCB1-1 (PubMed:25655823). Involved in the regulation of seed germination. May regulate the activation of embryonic growth potential during seed germination (PubMed:17953649, PubMed:22155632). Acts together with SPY to promote cytokinin responses that affect leaf shape and trichome development in flowers (PubMed:22267487). Transcription factor involved in the regulation of endoreduplication. Represses endoreduplication by activating the gene expression of the key cell-cycle regulators RBR1 and CYCA2-3 (PubMed:25757472). Regulates the expression of the defense gene pathogenesis-related protein 2 (PR2) in antagonism to SRFR1, a negative regulator of effector-triggered immunity (PubMed:24689742). Involved in positive regulation of plant defense. Represses jasmonate (JA) response to promote disease resistance. Regulates the plant immune system by transcriptionally repressing a subset of JA-responsive genes (PubMed:28132837). {ECO:0000269|PubMed:17953649, ECO:0000269|PubMed:21668538, ECO:0000269|PubMed:22155632, ECO:0000269|PubMed:22267487, ECO:0000269|PubMed:24689742, ECO:0000269|PubMed:25655823, ECO:0000269|PubMed:25757472, ECO:0000269|PubMed:28132837}. |
| Publications
? help Back to Top |
- Riechmann JL, et al.
Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.
Science, 2000. 290(5499): p. 2105-10
[PMID:11118137] - Yamada K, et al.
Empirical analysis of transcriptional activity in the Arabidopsis genome.
Science, 2003. 302(5646): p. 842-6
[PMID:14593172] - Vergnolle C, et al.
The cold-induced early activation of phospholipase C and D pathways determines the response of two distinct clusters of genes in Arabidopsis cell suspensions.
Plant Physiol., 2005. 139(3): p. 1217-33
[PMID:16258011] - Siemens J, et al.
Transcriptome analysis of Arabidopsis clubroots indicate a key role for cytokinins in disease development.
Mol. Plant Microbe Interact., 2006. 19(5): p. 480-94
[PMID:16673935] - Guti
Qualitative network models and genome-wide expression data define carbon/nitrogen-responsive molecular machines in Arabidopsis.
Genome Biol., 2007. 8(1): p. R7
[PMID:17217541] - Aguilar-Martínez JA,Poza-Carrión C,Cubas P
Arabidopsis BRANCHED1 acts as an integrator of branching signals within axillary buds.
Plant Cell, 2007. 19(2): p. 458-72
[PMID:17307924] - Tatematsu K,Nakabayashi K,Kamiya Y,Nambara E
Transcription factor AtTCP14 regulates embryonic growth potential during seed germination in Arabidopsis thaliana.
Plant J., 2008. 53(1): p. 42-52
[PMID:17953649] - Ascencio-Ib
Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection.
Plant Physiol., 2008. 148(1): p. 436-54
[PMID:18650403] - Hanada K, et al.
Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana.
Mol. Biol. Evol., 2011. 28(1): p. 377-82
[PMID:20736450] - Kieffer M,Master V,Waites R,Davies B
TCP14 and TCP15 affect internode length and leaf shape in Arabidopsis.
Plant J., 2011. 68(1): p. 147-58
[PMID:21668538] - Mukhtar MS, et al.
Independently evolved virulence effectors converge onto hubs in a plant immune system network.
Science, 2011. 333(6042): p. 596-601
[PMID:21798943] - Arabidopsis Interactome Mapping Consortium
Evidence for network evolution in an Arabidopsis interactome map.
Science, 2011. 333(6042): p. 601-7
[PMID:21798944] - Rueda-Romero P,Barrero-Sicilia C,G
Arabidopsis thaliana DOF6 negatively affects germination in non-after-ripened seeds and interacts with TCP14.
J. Exp. Bot., 2012. 63(5): p. 1937-49
[PMID:22155632] - Steiner E, et al.
The Arabidopsis O-linked N-acetylglucosamine transferase SPINDLY interacts with class I TCPs to facilitate cytokinin responses in leaves and flowers.
Plant Cell, 2012. 24(1): p. 96-108
[PMID:22267487] - Steiner E, et al.
Class I TCPs modulate cytokinin-induced branching and meristematic activity in tomato.
Plant Signal Behav, 2012. 7(7): p. 807-10
[PMID:22751297] - Danisman S, et al.
Analysis of functional redundancies within the Arabidopsis TCP transcription factor family.
J. Exp. Bot., 2013. 64(18): p. 5673-85
[PMID:24129704] - Kim SH, et al.
The Arabidopsis immune adaptor SRFR1 interacts with TCP transcription factors that redundantly contribute to effector-triggered immunity.
Plant J., 2014. 78(6): p. 978-89
[PMID:24689742] - Mar
Large-scale identification of gibberellin-related transcription factors defines group VII ETHYLENE RESPONSE FACTORS as functional DELLA partners.
Plant Physiol., 2014. 166(2): p. 1022-32
[PMID:25118255] - Davi
Class I TCP-DELLA interactions in inflorescence shoot apex determine plant height.
Curr. Biol., 2014. 24(16): p. 1923-8
[PMID:25127215] - We
Convergent targeting of a common host protein-network by pathogen effectors from three kingdoms of life.
Cell Host Microbe, 2014. 16(3): p. 364-75
[PMID:25211078] - Resentini F, et al.
TCP14 and TCP15 mediate the promotion of seed germination by gibberellins in Arabidopsis thaliana.
Mol Plant, 2015. 8(3): p. 482-5
[PMID:25655823] - Peng Y, et al.
The ubiquitin receptors DA1, DAR1, and DAR2 redundantly regulate endoreduplication by modulating the stability of TCP14/15 in Arabidopsis.
Plant Cell, 2015. 27(3): p. 649-62
[PMID:25757472] - Steiner E, et al.
The Putative O-Linked N-Acetylglucosamine Transferase SPINDLY Inhibits Class I TCP Proteolysis to Promote Sensitivity to Cytokinin.
Plant Physiol., 2016. 171(2): p. 1485-94
[PMID:27208284] - Yang L, et al.
Pseudomonas syringae Type III Effector HopBB1 Promotes Host Transcriptional Repressor Degradation to Regulate Phytohormone Responses and Virulence.
Cell Host Microbe, 2017. 21(2): p. 156-168
[PMID:28132837] - Zhang N, et al.
MOS1 functions closely with TCP transcription factors to modulate immunity and cell cycle in Arabidopsis.
Plant J., 2018. 93(1): p. 66-78
[PMID:29086441] - Mazur MJ, et al.
Arabidopsis TCP Transcription Factors Interact with the SUMO Conjugating Machinery in Nuclear Foci.
Front Plant Sci, 2017. 8: p. 2043
[PMID:29250092]
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