PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY47510.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 414aa MW: 45916.2 Da PI: 6.1392

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY47510.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.9	0.00069	10	32	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C +C+ks+ + +L H r+H TEY47510.1 10 YVCRICSKSCVSGKSLGDHVRVH 32 9********************99 PP
2	zf-C2H2	11	0.0014	111	130	2	21
EETTTTEEESSHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHir 21 +C Cgk F + L H+r TEY47510.1 111 SCRECGKEFASLRALSGHMR 130 6******************8 PP
3	zf-C2H2	12.1	0.00061	141	163	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cg+ F + + H+++H TEY47510.1 141 HSCKECGRGFDSMRAMFGHMKSH 163 79*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MGQIEEEHRY VCRICSKSCV SGKSLGDHVR VHLSQIASSK KAAAQEKLIG IKMECDDKND 60 DDHHQLNQSI SEEVEELGDG GDQSNSSYEL RENPKKSWRI SDPKHAKTAN SCRECGKEFA 120 SLRALSGHMR CHSIKNKKEV HSCKECGRGF DSMRAMFGHM KSHSTKRVMM KVPKPSVVES 180 GDFCSIRRKR SRIRYKGTVN HLSCSGVDVS CCGVSDLEEA EEAARCLVML SRGVGSFFKF 240 DSNAEDSEDD SAYFGGGVAS YVGKNVSEFE DEKGMKVDLV CDDEFLEHGI GSSNGSDDDD 300 ESCFENENLE LIEGFEEKKH SDGRLLLCAD SKHDRCGGEM ESSKVKEREC PICFKVFASG 360 QALGGHKRAH YNGVVESKNR EMLDLNFPVP ADSGSLSSWF AERSRGHEAM LITT

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MGQIEEEHRY VCRICSKSCV SGKSLGDHVR VHLSQIASSK KAAAQEKLIG IKMECDDKND  60
DDHHQLNQSI SEEVEELGDG GDQSNSSYEL RENPKKSWRI SDPKHAKTAN SCRECGKEFA  120
SLRALSGHMR CHSIKNKKEV HSCKECGRGF DSMRAMFGHM KSHSTKRVMM KVPKPSVVES  180
GDFCSIRRKR SRIRYKGTVN HLSCSGVDVS CCGVSDLEEA EEAARCLVML SRGVGSFFKF  240
DSNAEDSEDD SAYFGGGVAS YVGKNVSEFE DEKGMKVDLV CDDEFLEHGI GSSNGSDDDD  300
ESCFENENLE LIEGFEEKKH SDGRLLLCAD SKHDRCGGEM ESSKVKEREC PICFKVFASG  360
QALGGHKRAH YNGVVESKNR EMLDLNFPVP ADSGSLSSWF AERSRGHEAM LITT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26610.1	2e-14	C2H2 family protein