PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY46466.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 1253aa MW: 140614 Da PI: 8.666

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY46466.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.2	0.00026	1162	1184	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 Cp Cgk F ++ +L++H r+H TEY46466.1 1162 CPvkGCGKKFFSHKYLVQHRRVH 1184 9999*****************99 PP
2	zf-C2H2	12.5	0.00044	1220	1246	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C+ Cg++F+ s++ rH r+ H TEY46466.1 1220 YVCTeaGCGQTFRFVSDFSRHKRKtgH 1246 99********************99666 PP

Sequence ? help Back to Top
Protein Sequence Length: 1253 aa Download sequence
MAVESSAAGN IEVSPWLKSM AVAPEYHPSL AEFQDPIAYI FKIEKEASKY GICKIVPPVP 60 AAPRKTVVSN LNKSLLARSE SGPTFTTRQQ QVGFCPRKHR PTQKPVWQSG ERYTLAEFEA 120 KARNFEKSHL KKYVKKVLSA LDIETLYWNA MVDKPLSVEY ANDMPGSAFV ANKGGGKKSE 180 GAMTVGETEW NMRRLPRENL SLLRFMKEEI PGVTSPMVYV AMMFSWFAWH VEDHDLHSMN 240 YLHLGSGKTW YGVPKEAAVA FEEVIREHGY GGEINPLVTF ATLGEKTTVM SPEVLLNAGV 300 PCCRLDYTWL VQNAGEFVVT FPRAYHSGFS HGFNCGEAAN IATPEWLRVA KEAAIRRAAI 360 NCPPMVSHFQ LLYDLALSLC SRVPKSIAVE PRSSRLRDRK RGEGETLIKE QFFQDMIQNN 420 DMLSSLGQGS SVVLLPQNAL SSSFRSKTMV GFQSTTKSKL FPSLCSPDLE LRNTGFSSHD 480 ESTLERNQSP KQARSSVANK RTFSSLFGIN IPSPAPDAEQ QYSASKRASQ CQQGLFSCVT 540 CGILCFACVA IVQPKEVTAQ YLMSADCSIL QNLGESDNEG ANTNLSLGLM HMNTPNKHSA 600 SDSGIRSEPS SLSLLALAYS DSLDSEGEDC EVNDPIEGCG TSKSDDFRYG DACEKTEAKI 660 NCRKEISYEF DRNNSSMIES NSFTNRFSRH QTEPQFDIPD SLTCKAVGTP RSGLAPRQPT 720 TMPFVPRLDE DSSRLHVFCL QHAMQVCKRL SQLGGADVFL VCHPDYPKLE SQAKKVAEEL 780 NSDYIWNEVS FREATDEDEE IVRRALESEN AIHGNRDWAV KMGLNLFYSA NLSRSPLYSK 840 QMHYNSVIYN AFGRSSTTDR STSEGELEGR VLGRQRKIIV AGKWCGKVWM SNQAHPLLVN 900 KDSQEQEQEP AIASWTKPDV KYVRRSECSG LAAGKLSAVR KTSRKKTSNA ESCSFMEEKS 960 PETEKSDKMR SFYCHKKIKR KHGSRMPKED TPEVENQYES SEESQLQHGT KRLKKENLED 1020 EDEDDSLEEE YPLSKSWKQI KSNLRARQKE KETSDANNLK KGKTEESNSH SVDEMEGGPS 1080 TRLRKRTKKP SKDSGARTTK PKPVVKKQRD TTTKNTPAGK APTSSNKGKT RDEEAEYACD 1140 FEGCAMSFCS KHELTLHKKN ICPVKGCGKK FFSHKYLVQH RRVHMEDRPL KCPWKGCKMT 1200 FKWAWARTEH IRVHTGARPY VCTEAGCGQT FRFVSDFSRH KRKTGHAPKK ARG

Sequence ? help Back to Top

Protein Sequence Length: 1253 aa Download sequence

MAVESSAAGN IEVSPWLKSM AVAPEYHPSL AEFQDPIAYI FKIEKEASKY GICKIVPPVP  60
AAPRKTVVSN LNKSLLARSE SGPTFTTRQQ QVGFCPRKHR PTQKPVWQSG ERYTLAEFEA  120
KARNFEKSHL KKYVKKVLSA LDIETLYWNA MVDKPLSVEY ANDMPGSAFV ANKGGGKKSE  180
GAMTVGETEW NMRRLPRENL SLLRFMKEEI PGVTSPMVYV AMMFSWFAWH VEDHDLHSMN  240
YLHLGSGKTW YGVPKEAAVA FEEVIREHGY GGEINPLVTF ATLGEKTTVM SPEVLLNAGV  300
PCCRLDYTWL VQNAGEFVVT FPRAYHSGFS HGFNCGEAAN IATPEWLRVA KEAAIRRAAI  360
NCPPMVSHFQ LLYDLALSLC SRVPKSIAVE PRSSRLRDRK RGEGETLIKE QFFQDMIQNN  420
DMLSSLGQGS SVVLLPQNAL SSSFRSKTMV GFQSTTKSKL FPSLCSPDLE LRNTGFSSHD  480
ESTLERNQSP KQARSSVANK RTFSSLFGIN IPSPAPDAEQ QYSASKRASQ CQQGLFSCVT  540
CGILCFACVA IVQPKEVTAQ YLMSADCSIL QNLGESDNEG ANTNLSLGLM HMNTPNKHSA  600
SDSGIRSEPS SLSLLALAYS DSLDSEGEDC EVNDPIEGCG TSKSDDFRYG DACEKTEAKI  660
NCRKEISYEF DRNNSSMIES NSFTNRFSRH QTEPQFDIPD SLTCKAVGTP RSGLAPRQPT  720
TMPFVPRLDE DSSRLHVFCL QHAMQVCKRL SQLGGADVFL VCHPDYPKLE SQAKKVAEEL  780
NSDYIWNEVS FREATDEDEE IVRRALESEN AIHGNRDWAV KMGLNLFYSA NLSRSPLYSK  840
QMHYNSVIYN AFGRSSTTDR STSEGELEGR VLGRQRKIIV AGKWCGKVWM SNQAHPLLVN  900
KDSQEQEQEP AIASWTKPDV KYVRRSECSG LAAGKLSAVR KTSRKKTSNA ESCSFMEEKS  960
PETEKSDKMR SFYCHKKIKR KHGSRMPKED TPEVENQYES SEESQLQHGT KRLKKENLED  1020
EDEDDSLEEE YPLSKSWKQI KSNLRARQKE KETSDANNLK KGKTEESNSH SVDEMEGGPS  1080
TRLRKRTKKP SKDSGARTTK PKPVVKKQRD TTTKNTPAGK APTSSNKGKT RDEEAEYACD  1140
FEGCAMSFCS KHELTLHKKN ICPVKGCGKK FFSHKYLVQH RRVHMEDRPL KCPWKGCKMT  1200
FKWAWARTEH IRVHTGARPY VCTEAGCGQT FRFVSDFSRH KRKTGHAPKK ARG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	0.0	C2H2 family protein