PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY45122.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB

Protein Properties

Length: 739aa MW: 84161.7 Da PI: 7.6015

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY45122.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22	3.8e-07	456	497	2	40
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqc 40 ++WT+eE +ll ++ ++++g +W+ I++++g+gR+ +++ TEY45122.1 456 KPWTKEEIDLLRKGMLKFPKGtsrRWEVISEYIGTGRSVEEI 497 69***********************************99876 PP
2	Myb_DNA-binding	30.1	1.1e-09	683	728	4	47
S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 W+ ++ l++a k ++++ +W++Ia+ ++ g+t ++ck ++ ++ TEY45122.1 683 WSDVQEKALIQALKTFPKDtnqRWERIAAAVP-GKTVNHCKKKFASL 728 ******************************.*******99765 PP

Sequence ? help Back to Top
Protein Sequence Length: 739 aa Download sequence
MLLITYSEEI VDGKPILVCS NSLPIKVHRE PAGHAFHDAA LKLSGHFVEV DDKDKDDGKT 60 VLEEKENVYV QSSESYSSKG KKKSAGDSKQ QDHYALLGLS HLRYLATEDQ IRKSYREAAL 120 RHHPDKQAAL LLLEKTEVAK QAKKDEIESL FKSIQESYEV LIDPVKRRIY DSTDEFDDEI 180 PVDCAPQDFY KVFGPAFLRN GRWSVNQAVP TLGDDKSPIK EVDSFYDFWY AFKSWREFPH 240 ADEFDLEQAE SREDKRYMER QNAKLSEKAR KEEYARIRTL VDNAYKRDPR ILRRKDDLKA 300 EKVRKREAKV LAKKMQEEEA ARIIEEEKKR KEEEEKRAAE AASNQRKIKE KEKKLLRKER 360 TRLRTLTAPI LSQHLHGLNA DDVESLCSSY DKDQLKSLCD RMEGKELVES GNLLAECLNT 420 DQKPKDVKEV ENNSKPNGSV AMNGHATYSS YEKREKPWTK EEIDLLRKGM LKFPKGTSRR 480 WEVISEYIGT GRSVEEILKA TKTVLLQKPD SAKAFDSFLE KRKPMPMIVS PLTTREEVKG 540 TPINIEENES SAPDNLPVSS NPSVNNLSSG DSTAANGVSS DQDSWSVVQE KALIQALKTF 600 PKDTNQRWER VSAAVPGKSV AQCKKKITMM KDSFRSNNME DRGTEDLKDL KDSSSQNEET 660 TNASADSEAA VNDISSSSDA DMWSDVQEKA LIQALKTFPK DTNQRWERIA AAVPGKTVNH 720 CKKKFASLKE NFRSKKTTA

Sequence ? help Back to Top

Protein Sequence Length: 739 aa Download sequence

MLLITYSEEI VDGKPILVCS NSLPIKVHRE PAGHAFHDAA LKLSGHFVEV DDKDKDDGKT  60
VLEEKENVYV QSSESYSSKG KKKSAGDSKQ QDHYALLGLS HLRYLATEDQ IRKSYREAAL  120
RHHPDKQAAL LLLEKTEVAK QAKKDEIESL FKSIQESYEV LIDPVKRRIY DSTDEFDDEI  180
PVDCAPQDFY KVFGPAFLRN GRWSVNQAVP TLGDDKSPIK EVDSFYDFWY AFKSWREFPH  240
ADEFDLEQAE SREDKRYMER QNAKLSEKAR KEEYARIRTL VDNAYKRDPR ILRRKDDLKA  300
EKVRKREAKV LAKKMQEEEA ARIIEEEKKR KEEEEKRAAE AASNQRKIKE KEKKLLRKER  360
TRLRTLTAPI LSQHLHGLNA DDVESLCSSY DKDQLKSLCD RMEGKELVES GNLLAECLNT  420
DQKPKDVKEV ENNSKPNGSV AMNGHATYSS YEKREKPWTK EEIDLLRKGM LKFPKGTSRR  480
WEVISEYIGT GRSVEEILKA TKTVLLQKPD SAKAFDSFLE KRKPMPMIVS PLTTREEVKG  540
TPINIEENES SAPDNLPVSS NPSVNNLSSG DSTAANGVSS DQDSWSVVQE KALIQALKTF  600
PKDTNQRWER VSAAVPGKSV AQCKKKITMM KDSFRSNNME DRGTEDLKDL KDSSSQNEET  660
TNASADSEAA VNDISSSSDA DMWSDVQEKA LIQALKTFPK DTNQRWERIA AAVPGKTVNH  720
CKKKFASLKE NFRSKKTTA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	328	351	KKRKEEEEKRAAEAASNQRKIKEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06110.1	0.0	MYB family protein