PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY45115.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 331aa MW: 38610.5 Da PI: 10.146

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY45115.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.6	0.00019	137	160	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 y+C+ Cg++F +++ + +H r H TEY45115.1 137 YVCEVCGRRFHNNERFINHFRQiH 160 9******************99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MLNPTRYQTT SNKLHLYEKI RYLAPYYSIF GWGGYASISY QNHGSETPRG LEQNIGGKNV 60 AIFWDLDNKP PRSFPPYDAA LRIKKAAQQF GFVKYMIAYA NRHAFSYVPP EIREQRKERK 120 SLNQLENKGI VMPKEPYVCE VCGRRFHNNE RFINHFRQIH EREQMKRLNQ IESARGKRRL 180 NLVARNAVKM EKYRNAARDI LTPKVGYGLA DELKRAGFWV KTVSDKPQAA DVELRHRMVD 240 MMDRRMVECL VLVSDDSDFV EVLKEARMRC LKTVVVGDIS DGALKRTADA AFSWQEIMIG 300 KAKKEAVLVV GKWKDRNVLQ KLEWTYDPER D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12240.1	1e-133	C2H2 family protein