PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY43578.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

LBD

Protein Properties

Length: 331aa MW: 37326.8 Da PI: 6.9527

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY43578.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	132.1	2.2e-41	6	105	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk lrrkC+++Cv+apyfp ++p+kf nvhk+FGasnv+kll++l+ +reda++sl+yeAe r+rdP+yG+vg+i+ lqq+l+q++++l+ +k+ TEY43578.1 6 PCAACKCLRRKCTQECVFAPYFPPDNPQKFTNVHKVFGASNVSKLLNELSVAQREDAVNSLAYEAEHRLRDPIYGCVGFISVLQQRLSQVHVNLENAKK 104 7*********************************************************************************************99998 PP DUF260 100 e 100 e TEY43578.1 105 E 105 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MSSNSPCAAC KCLRRKCTQE CVFAPYFPPD NPQKFTNVHK VFGASNVSKL LNELSVAQRE 60 DAVNSLAYEA EHRLRDPIYG CVGFISVLQQ RLSQVHVNLE NAKKELASYI GPSGMAPMLN 120 HPGFVQQHGP QAYQLIPQNV QPVMGMQLVL RDQQHQQQLL IREQDQHQHH HQQQQQQQLM 180 MREQAPLQQH LVAQQQYLEA QQMAREQEMM QQQQHHNRSN DLMRFNSEGG GGGGAVTATG 240 LNQISSGGSG GGGVAMQQQQ PSLTLGSSYE ASHQQFQHQE QHEHEYEHGQ LHPLHLLQLQ 300 QLQEYIEAQQ DNERRMQKGK GKADPCIGPS C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66870.1	3e-63	LBD family protein