PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY42574.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family MIKC_MADS
Protein Properties Length: 191aa    MW: 22063.3 Da    PI: 6.813
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY42574.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF88.53.5e-281059251
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                +i+n++ rqvtfskRr g++KKAeELSvLCda+va++ifss+gkl+ey+s
  TEY42574.1 10 KIDNTTARQVTFSKRRRGLFKKAEELSVLCDADVALLIFSSSGKLFEYAS 59
                69**********************************************86 PP
2K-box48.63.4e-17951722299
       K-box  22 akLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                 +kL +ei +  + ++++ Ge+L+ Ls++eLq Le+ Le +l+++ +kK e ++++i  lq+k k+l een++Lr++++
  TEY42574.1  95 SKLSQEIAERSNLLKQMRGEELQGLSIEELQYLEKSLEVGLSRVMEKKGEKIMDEITLLQEKGKQLMEENQRLRQQVA 172
                 78999999999999*************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MAREKIQIRK IDNTTARQVT FSKRRRGLFK KAEELSVLCD ADVALLIFSS SGKLFEYASS  60
SMMEILERHK LHGKNLDKLE QPSLELQLVE DSIHSKLSQE IAERSNLLKQ MRGEELQGLS  120
IEELQYLEKS LEVGLSRVME KKGEKIMDEI TLLQEKGKQL MEENQRLRQQ VANISSDSGV  180
EETQWQLNRK T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.11e-91MIKC_MADS family protein