PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY41368.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

AP2

Protein Properties

Length: 388aa MW: 43261.4 Da PI: 8.0976

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY41368.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	55	2e-17	102	151	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g TEY41368.1 102 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTALAAARAYDRAAIKFRG 151 78*****************......55**********************997 PP
2	AP2	40.8	5.5e-13	194	244	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+ + eAa+a+++a+ k +g TEY41368.1 194 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDNEVEAARAYDKAAIKCNG 244 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MMFDLNLSAD CNWKADLCHS PATSVSSVVD GETASSNDDS CSTRAAVTLN FDIVVDRDCG 60 LVTRELFPAS GLGEPVTRSE VQPPQQQVQP RKSRRGPRSR SSQYRGVTFY RRTGRWESHI 120 WDCGKQVYLG GFDTALAAAR AYDRAAIKFR GVEADINFKL SDYEEDMKQT KKMSKEEFVQ 180 ILRRHSTGFS RGTSKYRGVT LHKCGRWEAR MGQFLGKKYI YLGLFDNEVE AARAYDKAAI 240 KCNGREAVTN FESSSYHTEI MPESSCLDLN LGISTSSPKE IQSFQFQPYQ VQKLHVAATR 300 PELDGFPVTS LHPILLPAPN YEERAGHGMS YSSEEVVKWA WRMHHATPST AASSGFSSPV 360 FSNSTPSLNL CFSSNPTNVY SSSQTPPC

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MMFDLNLSAD CNWKADLCHS PATSVSSVVD GETASSNDDS CSTRAAVTLN FDIVVDRDCG  60
LVTRELFPAS GLGEPVTRSE VQPPQQQVQP RKSRRGPRSR SSQYRGVTFY RRTGRWESHI  120
WDCGKQVYLG GFDTALAAAR AYDRAAIKFR GVEADINFKL SDYEEDMKQT KKMSKEEFVQ  180
ILRRHSTGFS RGTSKYRGVT LHKCGRWEAR MGQFLGKKYI YLGLFDNEVE AARAYDKAAI  240
KCNGREAVTN FESSSYHTEI MPESSCLDLN LGISTSSPKE IQSFQFQPYQ VQKLHVAATR  300
PELDGFPVTS LHPILLPAPN YEERAGHGMS YSSEEVVKWA WRMHHATPST AASSGFSSPV  360
FSNSTPSLNL CFSSNPTNVY SSSQTPPC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	5e-98	AP2 family protein