PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY41356.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

GRAS

Protein Properties

Length: 767aa MW: 86079.3 Da PI: 6.3694

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY41356.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	85.3	1e-26	142	247	1	117
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 lv+ L+ecAeav+++ ++la+al++++ l +++ +m+++a+yf+eALa+r++r ly p +++ s+ + + f+++ P++kf+h+taN TEY41356.1 142 LVHSLMECAEAVQKEAFKLAEALVKNIGFLTVSQAGAMRKVATYFAEALARRIYR----LY----PANSD---SAFTNLLHMHFYQTRPYMKFAHFTAN 229 689**************************************************....44....33333...3333344446************ PP GRAS 100 qaIleavegeervHiiDf 117 qaIle+++ + vH +Df TEY41356.1 230 QAILESFAVRDLVHAVDF 247 ***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 767 aa Download sequence
MWLCDADDEL FAVLGYSVKP PDMADVAQKI KHLEQVMCSV ENDGLSQLAS DTTHYNPSDL 60 SSWLESMISS LNPTLDFDSA VNRMVVDSDF GSDLTAIPGK SVYPNPRAKP PSPAKKLKLS 120 PQETESSESI VMVDLHENGI RLVHSLMECA EAVQKEAFKL AEALVKNIGF LTVSQAGAMR 180 KVATYFAEAL ARRIYRLYPA NSDSAFTNLL HMHFYQTRPY MKFAHFTANQ AILESFAVRD 240 LVHAVDFILE ILLMSEVNND FEDLLDEGAS GIRYSASSSS PSVAGDWRFQ AAEFAKGAAE 300 MSVEFGKGVR DVVKQTVLRE DSLIMKKFKG PCQKLFQRLR FLNEYLPEDR DPLHAWTVIA 360 FVSVLALAVL TFNMCGTSRI PLVNKMKVHP SSASIILLPD GRRLAYQEQG VPADRARHSM 420 IVPHSFLSSR LAGVPRVKGA LLEEFGIRLV TYDLPGFGES DPDPKRNLES SAMDILHLAY 480 AVNVTEKLWV LGYSDGSKHA WAALNYIPDR IAGAIILAPM VNPYDPRLSK AEIRRIWGKW 540 TLKRRLMYTL ARKFPRLLPY FYRRSFLSGN HGELDTLLSV SLGKRDRAVV EDRTFRDVWH 600 RNIEESVRQG NVRPFVEEAI LQVSNWGFSI GDLNGRNKYK GGGVLDWIKS LFNPAEKRLS 660 GFFGPIHIWH GDEDTIVPPS MSDFVQRDLP DAILHKLPYE GHFSYFYMCD ECHRQIFTTV 720 FGHAQGPLIV NDSRGPVEEV KENGEAICSS AAANEENLPA FAEEDDK

Sequence ? help Back to Top

Protein Sequence Length: 767 aa Download sequence

MWLCDADDEL FAVLGYSVKP PDMADVAQKI KHLEQVMCSV ENDGLSQLAS DTTHYNPSDL  60
SSWLESMISS LNPTLDFDSA VNRMVVDSDF GSDLTAIPGK SVYPNPRAKP PSPAKKLKLS  120
PQETESSESI VMVDLHENGI RLVHSLMECA EAVQKEAFKL AEALVKNIGF LTVSQAGAMR  180
KVATYFAEAL ARRIYRLYPA NSDSAFTNLL HMHFYQTRPY MKFAHFTANQ AILESFAVRD  240
LVHAVDFILE ILLMSEVNND FEDLLDEGAS GIRYSASSSS PSVAGDWRFQ AAEFAKGAAE  300
MSVEFGKGVR DVVKQTVLRE DSLIMKKFKG PCQKLFQRLR FLNEYLPEDR DPLHAWTVIA  360
FVSVLALAVL TFNMCGTSRI PLVNKMKVHP SSASIILLPD GRRLAYQEQG VPADRARHSM  420
IVPHSFLSSR LAGVPRVKGA LLEEFGIRLV TYDLPGFGES DPDPKRNLES SAMDILHLAY  480
AVNVTEKLWV LGYSDGSKHA WAALNYIPDR IAGAIILAPM VNPYDPRLSK AEIRRIWGKW  540
TLKRRLMYTL ARKFPRLLPY FYRRSFLSGN HGELDTLLSV SLGKRDRAVV EDRTFRDVWH  600
RNIEESVRQG NVRPFVEEAI LQVSNWGFSI GDLNGRNKYK GGGVLDWIKS LFNPAEKRLS  660
GFFGPIHIWH GDEDTIVPPS MSDFVQRDLP DAILHKLPYE GHFSYFYMCD ECHRQIFTTV  720
FGHAQGPLIV NDSRGPVEEV KENGEAICSS AAANEENLPA FAEEDDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66350.1	5e-74	GRAS family protein