PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY41321.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 323aa MW: 35925.8 Da PI: 8.1323

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY41321.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	22.8	2.4e-07	176	198	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ Cgk F+r nL+ H+r H TEY41321.1 176 HYCKVCGKGFKRDANLRMHMRAH 198 68*******************99 PP
2	zf-C2H2	11.5	0.00092	264	287	1	23
EEETTTT.EEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCg.ksFsrksnLkrHirtH 23 y+C+ C+ k Fs s+L++H + + TEY41321.1 264 YVCKRCNaKYFSVLSDLRTHEKHC 287 9*******************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MMTDPCYPNG PQNVPPIYGA SQQGMNPNSL SSPSTNQTSF LYDLSLLKDK VHEMQSLSSI 60 FTHHPESTPI VASTMGTLIQ EIIVTASSMM FACQQMSAPS PATAFEVDHK TTTATETLFV 120 NPHGDDSWYG DVAMGRNGDY TTIELPVKTE GEAAEGERSY ELIEVEAADL VAKYTHYCKV 180 CGKGFKRDAN LRMHMRAHGD EYKSSAALSN PAKNKGEETG MGTRKYSCPQ EGCRWNKRHA 240 RFQPLKSMIC VKNHYKRSHC PKMYVCKRCN AKYFSVLSDL RTHEKHCGDL KWLCSCGTTF 300 SRKDKLIGHV SLFLGHTPAT ALT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22890.1	1e-107	C2H2 family protein