PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY41288.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family C2H2
Protein Properties Length: 302aa    MW: 34614.4 Da    PI: 8.535
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY41288.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.98.3e-06149168120
                 EEETTTTEEESSHHHHHHHH CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHi 20 
                 ++C++C+k+F+r  n++ H+
  TEY41288.1 149 FSCSICNKTFNRYNNMQMHM 168
                 89*****************9 PP
2zf-C2H212.50.00045233256123
                 EEET.TTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCp.dCgksFsrksnLkrHirtH 23 
                 + C   CgksF  k + ++H +++
  TEY41288.1 233 FACRkSCGKSFAVKGDWRTHEKNC 256
                 77999***************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MLKNIKLLLI SRNSIECSSS HFPLITIFNS KSVLPQNAMS FFEFPLFYHH QQNDQETIQC  60
LPLLSRFTEK LEVKEEEDDC RVNENAAVAL HIGLPDIGEI DGDQRNRYGF KEDDEEYSVK  120
KNSCNGSLNG ERRFWIPTPA QILVGPMQFS CSICNKTFNR YNNMQMHMWG HGSEYRRGPE  180
SLRGAQPAAM LRLPCYCCAV GCKNNVNHPR AKPLKDFRTL QTHYKRKHGA KPFACRKSCG  240
KSFAVKGDWR THEKNCGKLW YCTCGSDFKH KRSLKDHIRS FGKGHAPHPS LEGFECSEDD  300
TA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08290.11e-113C2H2 family protein