PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY38318.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family C2H2
Protein Properties Length: 298aa    MW: 33859.7 Da    PI: 8.8759
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY38318.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.50.00044124146223
                 EETTTTEEESSHHHHHHHHHH.T CS
     zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                 +C+ C+++++++++L  H +  H
  TEY38318.1 124 SCSVCSQVYPTSHLLSIHVSEaH 146
                 6*****************99877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MAMEVEVSGT GLNFPFLQPL RRRFGPDALF FEAGNIERQL LAKQVTLDIT DEEKQQIQSM  60
EEWGSRYNNL LGGLVVTFSK LSDAYCIFKI FLISEVYCPI VGCGAHLQSL EDFEDHYTAR  120
HMASCSVCSQ VYPTSHLLSI HVSEAHDSFF QAKVARGYAM FLGVKGCMYL SQLLVFYECL  180
VEGCDAKLKS YKNRQQHLVD KHKFPSSFEF FKKSRPSKKQ RQKTQRKQAM HKTEDASTAM  240
QVDQENIDSL VSAVSRLSTS ESPSSISFGR RHTRGVTFVP RAVQKEKRPG QSSEQPKR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1218224KKQRQKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14140.11e-78C2H2 family protein