PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY38232.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 321aa MW: 36023.9 Da PI: 9.6082

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY38232.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.8	9.5e-06	60	79	2	21
EETTTTEEESSHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHir 21 +C+ Cgk+F+++ L H++ TEY38232.1 60 VCKECGKTFPSWKALFGHMK 79 6******************7 PP
2	zf-C2H2	10.8	0.0016	198	220	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F++ L H +H TEY38232.1 198 FRCSICKKDFRSYQALGGHRASH 220 89**********99999998887 PP
3	zf-C2H2	12.8	0.00035	246	268	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+C k+F++ L H r+H TEY38232.1 246 HECPICFKVFPSGQALGGHKRSH 268 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MEKEHICKFC SKSFPCGRSL GGHMRSHLIN NTPPLGHHPE MRPPKKKLPP LTLDHENHKV 60 CKECGKTFPS WKALFGHMKC HSPNSGGVLV MDSQSDNEAG TTPPCKRKRS YRTITTRDKS 120 YWGDIEGKNS KLDPKSSGVE SLQKLKAPRV ETKTRKLESL NNEAEVGYDE FEVNSPKKLI 180 KRRHHDQFGR EGNSNSKFRC SICKKDFRSY QALGGHRASH KKFKGCCAPR SSLETEDSHS 240 QKSKEHECPI CFKVFPSGQA LGGHKRSHLI ADQAKASPPH RTADRAFLDL NLPAPTEEEE 300 CGEFEPWWIG GAARLGLLST S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02030.1	5e-31	C2H2 family protein