PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY38026.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 510aa MW: 57287.7 Da PI: 7.512

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY38026.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12	0.00065	442	464	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + Cp C+++F++ L H r+H TEY38026.1 442 HACPFCDRVFKNGQALGGHKRSH 464 67******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 510 aa Download sequence
MAEESRYVCK LCNKRFPCGK SFGGHMRSHV VANSAEIEEN LECFDMKRDQ FVSESGNGQS 60 GYILRENPKK SWRAVRPPLQ EEKVCKQCGK GFKSMKALCG HMACHSERER GGASAKDDQY 120 SWTSENQKVV LDSHSDTEAE ERMVRIRTRS ASKSRKCKKV VEDWPFVLGN NGSSSVSEIV 180 DGHEQEEMAV CLMMLSRDCG VKVGVNSVVE SSDNNSVVVE TKSSSMEVRK ERVDRRVERY 240 EEEGKFGDGE TAKMEDSDSG YFLDECAKGE SEVSVDCNRR SGGFGVWKNS SQMNLKEIKS 300 CANELRKSRK GNAYDDDDVD EIVVDDDEKC GGIESRKRKY GSGFWNESAR MVKSGDKKSK 360 YECFNCKKTF KSYQALGGHR PCSKRTNAYG ECGENSPDDS AYYRSSTAKF VESPSKRKES 420 SAKSPSEKKS KTKKKKNNNK PHACPFCDRV FKNGQALGGH KRSHFLTGHD ESSSRSLVEK 480 PDDDIRDLLD LNLPAPEADE DEDGGHFFPW

Sequence ? help Back to Top

Protein Sequence Length: 510 aa Download sequence

MAEESRYVCK LCNKRFPCGK SFGGHMRSHV VANSAEIEEN LECFDMKRDQ FVSESGNGQS  60
GYILRENPKK SWRAVRPPLQ EEKVCKQCGK GFKSMKALCG HMACHSERER GGASAKDDQY  120
SWTSENQKVV LDSHSDTEAE ERMVRIRTRS ASKSRKCKKV VEDWPFVLGN NGSSSVSEIV  180
DGHEQEEMAV CLMMLSRDCG VKVGVNSVVE SSDNNSVVVE TKSSSMEVRK ERVDRRVERY  240
EEEGKFGDGE TAKMEDSDSG YFLDECAKGE SEVSVDCNRR SGGFGVWKNS SQMNLKEIKS  300
CANELRKSRK GNAYDDDDVD EIVVDDDEKC GGIESRKRKY GSGFWNESAR MVKSGDKKSK  360
YECFNCKKTF KSYQALGGHR PCSKRTNAYG ECGENSPDDS AYYRSSTAKF VESPSKRKES  420
SAKSPSEKKS KTKKKKNNNK PHACPFCDRV FKNGQALGGH KRSHFLTGHD ESSSRSLVEK  480
PDDDIRDLLD LNLPAPEADE DEDGGHFFPW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	336	371	RKRKYGSGFWNESARMVKSGDKKSKYECFNCKKTFK
2	416	436	KRKESSAKSPSEKKSKTKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26610.1	1e-41	C2H2 family protein