PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY36199.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

Trihelix

Protein Properties

Length: 445aa MW: 51291.1 Da PI: 6.589

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY36199.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	74.5	1.7e-23	118	216	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 +Wt+ +v++Li+a++++ e+ ++ +kk++W++vsk+m+erg +sp+qC++k+++lnkryk+++e+ +++ ++e++++ +++d ++ TEY36199.1 118 KWTDGMVRLLITAVSYISEEAAAEYggggarrkyanlQKKGKWKSVSKVMAERGHFVSPQQCEDKFNDLNKRYKRLNEILGRGtSCEVVEKPALLDVMD 216 7************9999998753345566778888********************************************6699999999999887 PP

Sequence ? help Back to Top
Protein Sequence Length: 445 aa Download sequence
MEGNLSSRSG MQGNTSFGGF DLQGPMRAHH HQQQQQAHVP HHHVRQGSSM VHHTIHENFP 60 LTMGSSQEEP SFSLTDYNKM DRGKSASDED DPSFTEDAAD NRGDPSKGKK ASPWQRVKWT 120 DGMVRLLITA VSYISEEAAA EYGGGGARRK YANLQKKGKW KSVSKVMAER GHFVSPQQCE 180 DKFNDLNKRY KRLNEILGRG TSCEVVEKPA LLDVMDHIPE KAKEEVRKIL SSKHLHYEEM 240 CSYHNGNRLH LPADPELQRS LRLALRSRDD HDESDAKRHL NDDNDEDDHE AEYEDHGEFE 300 ENQALAGDRR AYLLGNPAKR VKQCQTHDEF SFRNSLSSLD CNKTFSFQVE NADSDVNKAP 360 AEGSKMNAIA PKQSLSHWNI QIEEQRLNIE MQMLELEKEK FKWQRFCRKK DRELEMMRME 420 IERMKLENER MALDLRRKEL GIDSN

Sequence ? help Back to Top

Protein Sequence Length: 445 aa Download sequence

MEGNLSSRSG MQGNTSFGGF DLQGPMRAHH HQQQQQAHVP HHHVRQGSSM VHHTIHENFP  60
LTMGSSQEEP SFSLTDYNKM DRGKSASDED DPSFTEDAAD NRGDPSKGKK ASPWQRVKWT  120
DGMVRLLITA VSYISEEAAA EYGGGGARRK YANLQKKGKW KSVSKVMAER GHFVSPQQCE  180
DKFNDLNKRY KRLNEILGRG TSCEVVEKPA LLDVMDHIPE KAKEEVRKIL SSKHLHYEEM  240
CSYHNGNRLH LPADPELQRS LRLALRSRDD HDESDAKRHL NDDNDEDDHE AEYEDHGEFE  300
ENQALAGDRR AYLLGNPAKR VKQCQTHDEF SFRNSLSSLD CNKTFSFQVE NADSDVNKAP  360
AEGSKMNAIA PKQSLSHWNI QIEEQRLNIE MQMLELEKEK FKWQRFCRKK DRELEMMRME  420
IERMKLENER MALDLRRKEL GIDSN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	398	410	KEKFKWQRFCRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	1e-121	Trihelix family protein