PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY35550.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 679aa MW: 76815.8 Da PI: 4.7425

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY35550.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.8	0.00072	652	669	3	20
ETTTTEEESSHHHHHHHH CS zf-C2H2 3 CpdCgksFsrksnLkrHi 20 C++Cg+ F +k L++H+ TEY35550.1 652 CEKCGEEFESKNKLHKHL 669 *****************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 679 aa Download sequence
MASSEKRCLY EVLGLSRDCS ADEIRSAYRR LALQRHPDKL VRSGVSEADA TAAFQELVNA 60 YEVLSDDRER AWYDSHRNQI LFSSTSSSAG GASGGTSGFV PDLFSFFSNP VYSGYSDSGR 120 GFYKVYRDLF EKIYANELNF AKKLRLPLPR EAPVMGNLES PYVQVTAFYS YWLGFTTILE 180 FFWADQYDAM AGPNRKSRRL MEEENKKLRK KARREYNETV RGLAEFVKKR DKRVIDMQIK 240 RNEEMERKRE EEKQRKKELE RQKAEKARNY EEPEWAKVEE VEEEDESEDA LEEKKSEFYC 300 VACSKKFRSD KQWKNHEQSK KHKEKVAQLR EAFLEEDIKC EAEVDADDGS DIGYLSADDG 360 VSKLGEQFEA GIGIQEDDSD DGQNESGEAV EFEKDFSGRN GVAAGTGPDG EDDDDSDEAS 420 VFEAMLSGHR TRNKARNQPS APAAKTQMES DGDELDFTDY NDNTKGEDPK DFSGGNGVAE 480 GMGPDEEDDE DNDDGDEASV FEAMLSGRRS RNKERNQPRA PAAKTQTESD GDELGFMEYN 540 DTKGSRSNRG RRRRRGRRQE DAEPAKPSTA ERKDKAEEDE ECDGDATESI SEPPPESETT 600 RTEDAVREKV HQHQEQGANK KLPGKKENAA KSKAASKGRK QKVSTRGADN MCEKCGEEFE 660 SKNKLHKHLG ETGHASLKR

Sequence ? help Back to Top

Protein Sequence Length: 679 aa Download sequence

MASSEKRCLY EVLGLSRDCS ADEIRSAYRR LALQRHPDKL VRSGVSEADA TAAFQELVNA  60
YEVLSDDRER AWYDSHRNQI LFSSTSSSAG GASGGTSGFV PDLFSFFSNP VYSGYSDSGR  120
GFYKVYRDLF EKIYANELNF AKKLRLPLPR EAPVMGNLES PYVQVTAFYS YWLGFTTILE  180
FFWADQYDAM AGPNRKSRRL MEEENKKLRK KARREYNETV RGLAEFVKKR DKRVIDMQIK  240
RNEEMERKRE EEKQRKKELE RQKAEKARNY EEPEWAKVEE VEEEDESEDA LEEKKSEFYC  300
VACSKKFRSD KQWKNHEQSK KHKEKVAQLR EAFLEEDIKC EAEVDADDGS DIGYLSADDG  360
VSKLGEQFEA GIGIQEDDSD DGQNESGEAV EFEKDFSGRN GVAAGTGPDG EDDDDSDEAS  420
VFEAMLSGHR TRNKARNQPS APAAKTQMES DGDELDFTDY NDNTKGEDPK DFSGGNGVAE  480
GMGPDEEDDE DNDDGDEASV FEAMLSGRRS RNKERNQPRA PAAKTQTESD GDELGFMEYN  540
DTKGSRSNRG RRRRRGRRQE DAEPAKPSTA ERKDKAEEDE ECDGDATESI SEPPPESETT  600
RTEDAVREKV HQHQEQGANK KLPGKKENAA KSKAASKGRK QKVSTRGADN MCEKCGEEFE  660
SKNKLHKHLG ETGHASLKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	195	232	RKSRRLMEEENKKLRKKARREYNETVRGLAEFVKKRDK
2	206	214	KKLRKKARR
3	550	559	GRRRRRGRRQ
4	551	558	RRRRRGRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G74250.1	1e-131	C2H2 family protein