PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY35421.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 481aa MW: 50754.2 Da PI: 8.065

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY35421.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.7	4.4e-05	54	76	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k F r nL+ H r H TEY35421.1 54 FVCEVCKKGFQRDQNLQLHRRGH 76 89*******************88 PP
2	zf-C2H2	11.3	0.0011	130	152	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H + + TEY35421.1 130 WKCDKCSKKYAVQSDWKAHSKIC 152 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MNDSTASGDD SSGIQAAPPQ KAIAKKKRNL PGMPDPDAEV IALSPKTLMA TNRFVCEVCK 60 KGFQRDQNLQ LHRRGHNLPW KLRQRSSKDV KKRVYVCPEP SCVHHEPSRA LGDLTGIKKH 120 FCRKHGEKKW KCDKCSKKYA VQSDWKAHSK ICGTKEYKCD CGTLFNRKDS FITHRAFCDA 180 LAEETSKPAS VSPPSPPSPA SSPPPPLPLP SEHEDSTQTD VVSLSLPDNN NHGSLLNPDL 240 SFSVAFESWI LFFTEMLESA KPDSTSCRVL EETPVMTNLT SGSSCNGSSS SNVFATLFAS 300 STSSGSFQSQ TASFSNLFRS IACPDPTPAI APSSSSEPVA LGLAVNQGSS IFGTAGQDHM 360 QYPPAPLPSL SATALLQKAA QMGAAASNTS LLRGLGIASS SSSPSVSHDG PSLAGLGLAC 420 DSGSGLKELM LGTPSIFGPK HTTLDLLGLG MAATGGSTSG LSVLMNGGLD VGRDFGGQDI 480 R

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MNDSTASGDD SSGIQAAPPQ KAIAKKKRNL PGMPDPDAEV IALSPKTLMA TNRFVCEVCK  60
KGFQRDQNLQ LHRRGHNLPW KLRQRSSKDV KKRVYVCPEP SCVHHEPSRA LGDLTGIKKH  120
FCRKHGEKKW KCDKCSKKYA VQSDWKAHSK ICGTKEYKCD CGTLFNRKDS FITHRAFCDA  180
LAEETSKPAS VSPPSPPSPA SSPPPPLPLP SEHEDSTQTD VVSLSLPDNN NHGSLLNPDL  240
SFSVAFESWI LFFTEMLESA KPDSTSCRVL EETPVMTNLT SGSSCNGSSS SNVFATLFAS  300
STSSGSFQSQ TASFSNLFRS IACPDPTPAI APSSSSEPVA LGLAVNQGSS IFGTAGQDHM  360
QYPPAPLPSL SATALLQKAA QMGAAASNTS LLRGLGIASS SSSPSVSHDG PSLAGLGLAC  420
DSGSGLKELM LGTPSIFGPK HTTLDLLGLG MAATGGSTSG LSVLMNGGLD VGRDFGGQDI  480
R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66730.1	1e-101	C2H2 family protein