PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY35398.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

FAR1

Protein Properties

Length: 500aa MW: 58164.6 Da PI: 8.212

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY35398.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.1	6.8e-24	35	120	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fYn YAk+ GF +r+s+s +++ +e +++++ Cs g++++++ + ++r+etrtgC a+l +k+ + ++w++ ++el HnH+l+p TEY35398.1 35 DFYNVYAKRQGFGIRVSNSWFRSKRRERYRAKLSCSSAGFKKKSEAN-----NPRPETRTGCPAMLIIKLVDAQRWRIVEVELAHNHPLSP 120 6*******************99999***********99888.....9*********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 500 aa Download sequence
MILAAKKVQP SEPLEREFLP PMVGLEFESF DEAYDFYNVY AKRQGFGIRV SNSWFRSKRR 60 ERYRAKLSCS SAGFKKKSEA NNPRPETRTG CPAMLIIKLV DAQRWRIVEV ELAHNHPLSP 120 ESMRFYKSHK KMILAAKKAQ PSEPVREVHT IKLYRTAVAD GLCRADTRNE RNSMDHSNHL 180 ILKEGDSLAA YESVECFIWM IRTWLTCMLG KHPQVIVTDQ SKHLHIAVSE VFPQACHCYC 240 LSYIMLRVPE KLGGLNGFEV IKRRFSKAVF GSLTISEFET FWREMISQHN LRENKWLQAF 300 EGEGTTPFFD GYVHKHTSSK EFLDKYDMVL QRKYLKEAMG DVESRNLASE LKTGSNFELQ 360 LSKQVAKNAP ILTFVVEQRQ KAEANEKDVR HYEVLYETTQ VEVGCICGLF NFKGYLCRHA 420 LSVLSHNGVE EIPSQYILRR WSKDYKRRFL SDGAIGEDSP WEWHEHLLRR SLQVVEEGAQ 480 SEDHYEVMMQ DMNGQELYMQ

Sequence ? help Back to Top

Protein Sequence Length: 500 aa Download sequence

MILAAKKVQP SEPLEREFLP PMVGLEFESF DEAYDFYNVY AKRQGFGIRV SNSWFRSKRR  60
ERYRAKLSCS SAGFKKKSEA NNPRPETRTG CPAMLIIKLV DAQRWRIVEV ELAHNHPLSP  120
ESMRFYKSHK KMILAAKKAQ PSEPVREVHT IKLYRTAVAD GLCRADTRNE RNSMDHSNHL  180
ILKEGDSLAA YESVECFIWM IRTWLTCMLG KHPQVIVTDQ SKHLHIAVSE VFPQACHCYC  240
LSYIMLRVPE KLGGLNGFEV IKRRFSKAVF GSLTISEFET FWREMISQHN LRENKWLQAF  300
EGEGTTPFFD GYVHKHTSSK EFLDKYDMVL QRKYLKEAMG DVESRNLASE LKTGSNFELQ  360
LSKQVAKNAP ILTFVVEQRQ KAEANEKDVR HYEVLYETTQ VEVGCICGLF NFKGYLCRHA  420
LSVLSHNGVE EIPSQYILRR WSKDYKRRFL SDGAIGEDSP WEWHEHLLRR SLQVVEEGAQ  480
SEDHYEVMMQ DMNGQELYMQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	2e-84	FAR1 family protein