PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY35131.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | C3H | ||||||||
Protein Properties | Length: 560aa MW: 62769 Da PI: 9.1834 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 32.8 | 1.2e-10 | 63 | 85 | 5 | 27 |
--SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 5 lCrffartGtCkyGdrCkFaHgp 27 C+++ rtG C++G++C+F+H+p TEY35131.1 63 DCSYYIRTGVCRFGPTCRFNHPP 85 7********************96 PP | |||||||
2 | zf-CCCH | 37.7 | 3.3e-12 | 106 | 130 | 3 | 27 |
S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 3 telCrffartGtCkyGdrCkFaHgp 27 +++C ++++tGtCk+G++CkF+H++ TEY35131.1 106 QPECEYYLKTGTCKFGATCKFHHPR 130 799********************96 PP | |||||||
3 | zf-CCCH | 30.8 | 5.2e-10 | 183 | 206 | 4 | 27 |
---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHgp 27 +C ++ r+G+Ck+G++CkF+H++ TEY35131.1 183 TECAYYIRNGQCKFGSTCKFHHPQ 206 58********************97 PP | |||||||
4 | zf-CCCH | 37.6 | 3.8e-12 | 329 | 354 | 2 | 27 |
-S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHgp 27 ++++C+f+++tG Ck+G+ CkF+H++ TEY35131.1 329 GQSECQFYMKTGDCKFGAVCKFHHPK 354 7899********************96 PP | |||||||
5 | zf-CCCH | 35.3 | 2e-11 | 376 | 400 | 3 | 27 |
S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 3 telCrffartGtCkyGdrCkFaHgp 27 ++ C f++r+G+Ck+G++CkF H++ TEY35131.1 376 EPVCVFYSRYGICKFGPSCKFDHPM 400 789********************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 560 aa Download sequence |
MWMRVVNSYV ASFRFLLYAP PREDFRCDVV VIDFVIYVLW PVTLRSREQM ESGPYPVREG 60 ELDCSYYIRT GVCRFGPTCR FNHPPNRKLA IATAMMKGEY PERIGQPECE YYLKTGTCKF 120 GATCKFHHPR DKAGITGRVA LNVLGYPLCP FMKGLGLARL LDDVHLHKRR THTLVPYWRV 180 NETECAYYIR NGQCKFGSTC KFHHPQPSNM MVSLRGSAVY PAIHSPTTNQ LSYPLSRASF 240 IASPRWQSPS SYTPLVMQQG VVSVPGWNTY SGQPSSALSS ENQPPSAVNI HNDGTSHQDD 300 SGNIASEYGS VPMGYYAFQK DNVFPERPGQ SECQFYMKTG DCKFGAVCKF HHPKERLIPV 360 PDCHLSPIGL PLRLGEPVCV FYSRYGICKF GPSCKFDHPM TVFAYNTPAS SSTDSAAIRR 420 FLASSPGTVP ANFSSDGLMD ESYTNNRRLS LSEARQKPSG YWLVIFYVRL SETSRFLFNS 480 IAFWVICSMG MGAGLKPVFL IQPTLIQGLT YAYLGSVVKQ PWKRSKERDA SFNSSRGANS 540 STLIIRVIAS AIFCRGIGVL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 168 | 172 | KRRTH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02830.1 | 1e-158 | C3H family protein |