PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY34924.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 480aa MW: 50456.1 Da PI: 9.337

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY34924.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.1	0.00058	93	115	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg+ F+ L H+r+H TEY34924.1 93 HECGICGQEFPLGQALGGHMRKH 115 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence
MMMKRSRDCT GNGDGDEASA VANFLMLLSA AAAAHGSSGD RLLAGEDSSR IFTCKTCDRQ 60 FSSFQALGGH RASHKKPRLG DGEPPSPPKP KTHECGICGQ EFPLGQALGG HMRKHRAAVV 120 DQNHHEAAAA APLPIFPVVK KPNGRMSAES MARQATRLIA SLSSRLLRPN QLNQLRNFGS 180 PPPPPAVFVD KNTRILCQGI TGKNGTFHTE QAIEYGTKMV GGVTPKKGGT EHLGLPVFNT 240 VAEAKAETKA NASVIYVPPP FAAKAIMEAL EAELDLVVCI TEGIPQHDMV RVKAALNQQS 300 RTRLIGPNCP GIIKPGECKI GIMPGYIHKP GRIGIVSRSG TLTYEAVFQT TAVGLGQSTC 360 VGIGGDPFNG TNFVDCMEKF LVDPQTEGIV LIGEIGGTAE EDAAALIKAS GTQKPIVAFI 420 AGLTAPPGRR MGHAGAIVSG GKGTAQDKIK TLREAGVTVV ESPAKIGTAM LEVFKQRGLV

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence

MMMKRSRDCT GNGDGDEASA VANFLMLLSA AAAAHGSSGD RLLAGEDSSR IFTCKTCDRQ  60
FSSFQALGGH RASHKKPRLG DGEPPSPPKP KTHECGICGQ EFPLGQALGG HMRKHRAAVV  120
DQNHHEAAAA APLPIFPVVK KPNGRMSAES MARQATRLIA SLSSRLLRPN QLNQLRNFGS  180
PPPPPAVFVD KNTRILCQGI TGKNGTFHTE QAIEYGTKMV GGVTPKKGGT EHLGLPVFNT  240
VAEAKAETKA NASVIYVPPP FAAKAIMEAL EAELDLVVCI TEGIPQHDMV RVKAALNQQS  300
RTRLIGPNCP GIIKPGECKI GIMPGYIHKP GRIGIVSRSG TLTYEAVFQT TAVGLGQSTC  360
VGIGGDPFNG TNFVDCMEKF LVDPQTEGIV LIGEIGGTAE EDAAALIKAS GTQKPIVAFI  420
AGLTAPPGRR MGHAGAIVSG GKGTAQDKIK TLREAGVTVV ESPAKIGTAM LEVFKQRGLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59820.1	5e-27	C2H2 family protein