PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY32697.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | FAR1 | ||||||||
Protein Properties | Length: 149aa MW: 16640.6 Da PI: 6.9338 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 66.5 | 7e-21 | 33 | 107 | 1 | 89 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +fY+ YA+++GF++r+ + ++s+ +g+ ++r+fvC keg++++ rtgC a ++v+k ++gkw+v+++++eHnHe+ TEY32697.1 33 EFYSMYATQAGFKTRIGQLYRSRVDGSAISRRFVCAKEGFQTP--------------LRTGCPAFIRVQKVDSGKWVVANIKKEHNHEI 107 6***************************************998..............489***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 149 aa Download sequence |
MVGKSNGHQE NEEESNMEPY VGLEFNTAEE AQEFYSMYAT QAGFKTRIGQ LYRSRVDGSA 60 ISRRFVCAKE GFQTPLRTGC PAFIRVQKVD SGKWVVANIK KEHNHEIEAS EEICPRIQRK 120 VFPTPTSSIG GASRTGIRSH EDDSPSALL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06250.1 | 3e-49 | FAR1 family protein |