PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY32290.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 673aa MW: 74682 Da PI: 7.6238

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY32290.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.1	0.0006	530	552	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F ++ L H +H TEY32290.1 530 YTCKTCDRVFASSQALGGHRTSH 552 9**************99998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 673 aa Download sequence
MSEKEGFPNL NLLNAAPIGY KVEEAARPCP QILARRKLAD ISNLPQNWKS QPIPTTITKE 60 YVEQLRKELN SRKDRLKQLQ HELGCKNGSL QARNSKLEEN VIKEDEPSKE GEDHKKPRNA 120 KKRTRSLCLG SSEESQSKDD AGNRLPVRRH SSRFEVFKPD DDSVSEMYDP KIPKCSLPDA 180 SVNNEEHVAN RPSGRRQSAR FKSATPSPIP DETVQENGSS IAEMSVINEG HAVQRPSVRR 240 QSTRLKAVTP CPIPDETVHE ISVETVHETS VETSVITEGN DMKRPSVRRQ STRLKAVTQC 300 PIPDETVHET AVETVHETAV ETVHETAVET VHETSVETVH ETSVETSVIT EGHAIQRTSV 360 RKQSIRSRTK IPKQADDPSE MDCTISTNCT SLDEPVPPVT DSGSTSADTP VENENDGSCS 420 SGWGCDSQGS RKPSLGRPSR VATRKVQTYR ERSLKDKMRR PVQAHQETEK RPHSLSPSFS 480 VAVDSPTTAE EDAARCLIHL SRGHFLHGEN SNENFKQNNL HPQFTDGGTY TCKTCDRVFA 540 SSQALGGHRT SHTKPKNDKK SASFHDSGID DFLLSKKKIP PLSLHTAAGD GGGRRISSPR 600 VHECSYCGAE FASGPALGGH MRRHRAGTTS PLPEPKRPRN GLALDLNFPA LEDESQRFKY 660 ELKYEEVQLF LTH

Sequence ? help Back to Top

Protein Sequence Length: 673 aa Download sequence

MSEKEGFPNL NLLNAAPIGY KVEEAARPCP QILARRKLAD ISNLPQNWKS QPIPTTITKE  60
YVEQLRKELN SRKDRLKQLQ HELGCKNGSL QARNSKLEEN VIKEDEPSKE GEDHKKPRNA  120
KKRTRSLCLG SSEESQSKDD AGNRLPVRRH SSRFEVFKPD DDSVSEMYDP KIPKCSLPDA  180
SVNNEEHVAN RPSGRRQSAR FKSATPSPIP DETVQENGSS IAEMSVINEG HAVQRPSVRR  240
QSTRLKAVTP CPIPDETVHE ISVETVHETS VETSVITEGN DMKRPSVRRQ STRLKAVTQC  300
PIPDETVHET AVETVHETAV ETVHETAVET VHETSVETVH ETSVETSVIT EGHAIQRTSV  360
RKQSIRSRTK IPKQADDPSE MDCTISTNCT SLDEPVPPVT DSGSTSADTP VENENDGSCS  420
SGWGCDSQGS RKPSLGRPSR VATRKVQTYR ERSLKDKMRR PVQAHQETEK RPHSLSPSFS  480
VAVDSPTTAE EDAARCLIHL SRGHFLHGEN SNENFKQNNL HPQFTDGGTY TCKTCDRVFA  540
SSQALGGHRT SHTKPKNDKK SASFHDSGID DFLLSKKKIP PLSLHTAAGD GGGRRISSPR  600
VHECSYCGAE FASGPALGGH MRRHRAGTTS PLPEPKRPRN GLALDLNFPA LEDESQRFKY  660
ELKYEEVQLF LTH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03510.1	1e-26	C2H2 family protein