PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY31633.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 220aa MW: 25026.6 Da PI: 9.9471 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 80.8 | 8.9e-26 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr g++KKA+EL +LCdae+a+i+fs tg+l++yss TEY31633.1 9 KKIDNLTSRQVTFSKRRRGLFKKAKELATLCDAEIALIVFSATGRLFDYSS 59 68***********************************************96 PP | |||||||
2 | K-box | 35.2 | 5.1e-13 | 95 | 177 | 24 | 98 |
K-box 24 LkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkk........ekelqeenkaLrkkl 98 + ke+ L re ++l Ge+L++Ls++eL +Le+ +e++l ++ ++Kn+ l+ +i++l + e el++en++L+++ TEY31633.1 95 ISKELTALTREYKQLNGEELQDLSMNELARLERVVESALGRVSKTKNDQLMFEISKLETRassklnlyEIELKKENEMLKQQA 177 6789999**********************************************999887743344444677888888888876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MVRQKIEIKK IDNLTSRQVT FSKRRRGLFK KAKELATLCD AEIALIVFSA TGRLFDYSSS 60 SMTQVIQRRK AQPEGINRLR QTFLNQVGGD IDDAISKELT ALTREYKQLN GEELQDLSMN 120 ELARLERVVE SALGRVSKTK NDQLMFEISK LETRASSKLN LYEIELKKEN EMLKQQAEKK 180 RNATEQGSSV ESIANSYGFR ARCPYEDKSA SDTALKLGYA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 1e-54 | MIKC_MADS family protein |