PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY31613.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MIKC_MADS

Protein Properties

Length: 198aa MW: 23182.6 Da PI: 10.1017

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY31613.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	85.7	2.7e-27	16	65	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRr g+lKKA+ELS+LCdaev +i+fsst kly+++s TEY31613.1 16 RIDNSTSRQVTFSKRRSGLLKKAKELSILCDAEVGLIVFSSTEKLYDFAS 65 8***********************************************86 PP
2	K-box	82.1	1.3e-27	88	176	10	98
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +++ + +q+e++ L+++++ Lq+ R+llGe+L+ Ls+++Lq+Le+qLekslk +R++K++ ++e+i+el +k + +q+en +L+kk+ TEY31613.1 88 PTSEIKFWQREASSLRQQLQYLQQCRRRLLGEELSGLSVEDLQNLENQLEKSLKGVRTRKEQTMREEIRELHMKANLTQQENLELHKKI 176 567899*********************************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 198 aa Download sequence
MVLGEEMGRG KIVIRRIDNS TSRQVTFSKR RSGLLKKAKE LSILCDAEVG LIVFSSTEKL 60 YDFASTSMKS VIERYTKLKE DNYRFINPTS EIKFWQREAS SLRQQLQYLQ QCRRRLLGEE 120 LSGLSVEDLQ NLENQLEKSL KGVRTRKEQT MREEIRELHM KANLTQQENL ELHKKIHFVS 180 QENAELHKRN KPDVVNLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37940.1	5e-71	MIKC_MADS family protein