PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY31178.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | LBD | ||||||||
Protein Properties | Length: 248aa MW: 27902.3 Da PI: 5.343 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 134.7 | 3.4e-42 | 7 | 106 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk lrrkC+++Cv+apyfp ++p+kf vhk+FGasnv+kll++l+ +reda++sl+yeAe r+rdPvyG+vg+i+ lqq+l+q++++l+ +k+ TEY31178.1 7 PCAACKCLRRKCTQECVFAPYFPPDNPQKFTTVHKVFGASNVSKLLNELSAAQREDAVNSLAYEAEYRLRDPVYGCVGLISVLQQRLRQVQVDLENAKK 105 7**********************************************************************************************9998 PP DUF260 100 e 100 e TEY31178.1 106 E 106 7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MSSSNSPCAA CKCLRRKCTQ ECVFAPYFPP DNPQKFTTVH KVFGASNVSK LLNELSAAQR 60 EDAVNSLAYE AEYRLRDPVY GCVGLISVLQ QRLRQVQVDL ENAKKELSTY IGPSAMLPIL 120 SHPGFAGNYA AAPYQVVPYN TIMLPPQPQQ QFVEQLAAAR EQEEMLLSYE QNNDIMRFNG 180 GFDDRGGRPV TATGFNEGGG AMQFEAIPYR QAQAQQHHHL HLQQQQQEQQ QPKEEEEEKE 240 MTNYAPQC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66870.1 | 3e-64 | LBD family protein |