PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY29674.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB

Protein Properties

Length: 278aa MW: 31272.9 Da PI: 4.7357

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY29674.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.1	4e-08	13	50	1	38
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlk 38 +g+W eEd+ l++ vk++G ++W++I ++ ++Rt+k TEY29674.1 13 KGPWKFEEDQVLINHVKKYGARDWSSIRSKGLLRRTGK 50 79************************977655677766 PP
2	Myb_DNA-binding	44	5.3e-14	52	92	2	44
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 +++T+eE+ +d+ +q+G++ W++Ia ++ gRt++++k++w TEY29674.1 52 LKFTAEEERTVIDLQAQFGNK-WAKIATYLA-GRTDNDVKNFW 92 68*****************.*****.********* PP

Sequence ? help Back to Top
Protein Sequence Length: 278 aa Download sequence
MTSQDDEMRD MKKGPWKFEE DQVLINHVKK YGARDWSSIR SKGLLRRTGK GLKFTAEEER 60 TVIDLQAQFG NKWAKIATYL AGRTDNDVKN FWSSRQKRLA RILSSSTASS STSQIPTFDF 120 LPSLEVINTS LFSHFMTHKS QSFIHTQAPN LSQSREEEFG ANSQFGEVAS PSPISAVPVE 180 QQQPYISFPQ FPLLQLDYPL LLEGQDFTGR FEAPSFLDDE LGHSALGTAQ VPIAPSYQAL 240 GTSESHIEVD INSLIEDDFP PIDLFDEIEP LPSPSHWS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60460.1	2e-50	MYB family protein