PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY29127.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | LBD | ||||||||
Protein Properties | Length: 96aa MW: 10347.2 Da PI: 8.1484 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 81 | 1.9e-25 | 11 | 87 | 1 | 75 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAea.rardPvyG 75 +C aCk+lrrkC+k+Cv+apyf ++q +++fa+vh++FGasn +kll ++p++ da+ +l+yeA a ++ dP+ + TEY29127.1 11 PCGACKFLRRKCVKGCVFAPYFDSDQgAAHFAAVHRVFGASNASKLLLRIPPHCCLDAIVTLCYEALAkCITDPILS 87 7***********************9989**************************************98357899876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 96 aa Download sequence |
MSCVVERDGG PCGACKFLRR KCVKGCVFAP YFDSDQGAAH FAAVHRVFGA SNASKLLLRI 60 PPHCCLDAIV TLCYEALAKC ITDPILSSPA TPLFER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45410.1 | 4e-37 | LBD family protein |