PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY26653.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 378aa MW: 43784 Da PI: 9.5955

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY26653.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.8	0.00036	136	159	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 y+C+ Cg++F +++ + +H r H TEY26653.1 136 YVCKVCGRRFHNNERFINHFRQiH 159 9******************99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MLNPIRYQTT FNKLHLYEKI RALAPSYSIC GWGGFTSISN QNQDSETPQG LEQSIDKNVA 60 IFWDLDNKPP RSFPPYDAAL RIKKAAQQFG FVKYMIAYAN SHAFSYVPPA IQEQRKERKS 120 LNQLENKGIV MPREPYVCKV CGRRFHNNER FINHFRQIHE REQMKRLNQI ESARGKRRLN 180 LVARNAVKME KYRNAARDIL TPKVGYGLAD ELKRAGFWVK TVSDKPQAAD VELRNRMVDM 240 MDRRMVECLV LVSDDSDFVE VLKEARMRCL KTVVVGDISD GALKRTADAA FSWQEIMIGK 300 AKKEAVSVVG KWKDRNVLQK LEWTYDPERD KRMHFHAIES GDSDSDIGCF SSDEGESLLG 360 KEKKGEWWEL ERNQRPPE

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MLNPIRYQTT FNKLHLYEKI RALAPSYSIC GWGGFTSISN QNQDSETPQG LEQSIDKNVA  60
IFWDLDNKPP RSFPPYDAAL RIKKAAQQFG FVKYMIAYAN SHAFSYVPPA IQEQRKERKS  120
LNQLENKGIV MPREPYVCKV CGRRFHNNER FINHFRQIHE REQMKRLNQI ESARGKRRLN  180
LVARNAVKME KYRNAARDIL TPKVGYGLAD ELKRAGFWVK TVSDKPQAAD VELRNRMVDM  240
MDRRMVECLV LVSDDSDFVE VLKEARMRCL KTVVVGDISD GALKRTADAA FSWQEIMIGK  300
AKKEAVSVVG KWKDRNVLQK LEWTYDPERD KRMHFHAIES GDSDSDIGCF SSDEGESLLG  360
KEKKGEWWEL ERNQRPPE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12240.1	1e-131	C2H2 family protein